Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0510 |
Symbol | |
ID | 4081400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 527847 |
End bp | 529136 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008868 |
Product | adenylosuccinate synthetase |
Protein accession | YP_615564 |
Protein GI | 103486003 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0104] Adenylosuccinate synthase |
TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.37093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.446838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATG TTACCGTCAT CGGGTCGCAA TGGGGCGACG AGGGCAAGGG CAAGATCGTC GACTGGCTCG CCAGCCGTGC CGATGCCGTG GTCCGGTTCC AGGGCGGTCA CAACGCCGGC CATACGCTCG TCGTCGGCGA GCAGGTGTAC AAGCTGTCGC TGCTGCCTTC GGGCATCGTC ACCGGCACGC TGTCGATCAT CGGCAATGGC GTCGTGCTCG ATCCCTGGGC GCTGCGCGAC GAGATCACCA AGCTGCGCGG CCAGGGGGTC GAGATCAACG CCGACAATTT CGCGATCGCC GACAATTGCG CGCTGATCCT GCCCTTTCAC CGCGACCTCG ACGCGCTGCG CGAAACCGCG GCGGGCGCGG GCAAGATCGG CACCACCGGG CGCGGCATCG GCCCGGCCTA TGAGGACAAG GTCGGTCGCC GCGCGATCCG CGTCTGCGAC CTGGCGCACC TCGACCATCT CGAACCCCAG CTCGACCGGC TGACCGCGCA CCACGACGCG CTGCGCGCGG GCTTCGGCGA ACCGCCCATC GACCGCGACA AGCTGGTCGC CGACCTCAGG GAAATCGCCG ATTATGTGCT CGAATATGCG CAGCCGGTGT GGAAGCGGCT GAAAAAGGTC CGCAAGGCCG GCGCGCGCAT ATTGTTCGAG GGCGCGCAGG GCGTGCTGCT CGACATCGAC CACGGCACCT ATCCCTTTGT CACCAGCTCG AACACGGTGA GCGGCACCGC GGCCTCGGGA TCGGGTCTCG GCCCCGGCGC GGTCGGCTTC GTGCTCGGCA TCGCCAAGGC CTATACCACC CGCGTCGGCA GCGGCCCCTT CCCCACCGAA CTGGAGGATG AAACGGGCCA GCGTTTGGGT GAACGCGGGC ATGAGTTCGG GACCGTCACC GGGCGCAAGC GCCGCTGCGG CTGGTTCGAC GCCGTGCTCG TGCGGCAGAG CTGCGCGGTA TCGGGCGTCA CCGGCATCGC GCTGACCAAG CTCGACGTGC TCGACGGCTT TGACACGATC CGCATCTGCA CCGGCTACCG TCTCAGGGGA AAAATCCTCG ACTATTTCCC CGCGCACGCC GCCGATCAGG CCGCGGTCGA GCCGATTTAC GAGGAAATGG ACGGCTGGCA CGAATCGACC GCGGGCGCAC GCAGCTATGC CGACCTGCCC GCGCAGGCGA TCAAATATAT CCAGCGCGTG CAGGAACTGA TCGAAACGCC GATCGCGCTG GTGTCGACCA GCCCCGAACG CGAGGACACG ATCCTGATCC GCGATCCCTT CAGCGACTAG
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Protein sequence | MANVTVIGSQ WGDEGKGKIV DWLASRADAV VRFQGGHNAG HTLVVGEQVY KLSLLPSGIV TGTLSIIGNG VVLDPWALRD EITKLRGQGV EINADNFAIA DNCALILPFH RDLDALRETA AGAGKIGTTG RGIGPAYEDK VGRRAIRVCD LAHLDHLEPQ LDRLTAHHDA LRAGFGEPPI DRDKLVADLR EIADYVLEYA QPVWKRLKKV RKAGARILFE GAQGVLLDID HGTYPFVTSS NTVSGTAASG SGLGPGAVGF VLGIAKAYTT RVGSGPFPTE LEDETGQRLG ERGHEFGTVT GRKRRCGWFD AVLVRQSCAV SGVTGIALTK LDVLDGFDTI RICTGYRLRG KILDYFPAHA ADQAAVEPIY EEMDGWHEST AGARSYADLP AQAIKYIQRV QELIETPIAL VSTSPEREDT ILIRDPFSD
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