Gene Sala_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0495 
Symbol 
ID4081385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp512621 
End bp513838 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content63% 
IMG OID638008853 
Productargininosuccinate synthase 
Protein accessionYP_615549 
Protein GI103485988 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.337809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.895355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT CCATCAAGCG CGTCGTCCTT GCCTATTCGG GTGGTCTCGA CACCAGCGTC 
ATCCTGAAAT GGCTGCAGGT GACCTATGGC TGCGAGGTCG TGACCTTTAC CGCCGATCTG
GGGCAGGGCG AGGAGCTGGA ACCCGCGCGC GCCAAGGCCG AGCTGATGGG GATCAAGCCC
GAACATATCT ATATCGACGA TTTGCGCGAG GAGTTCGTGC GTGACTTCGT TTTCCCGATG
ATGCGCGCCA ATGCGCGCTA CGAGGGCGAT TACCTGCTCG GCACGTCGAT CGCGCGGCCG
CTGATTTCGA AGCGGCTGGT CGAGATCGCC AGGGAAACGG GCGCCGATGC GGTGGCGCAT
GGCGCGACGG GCAAGGGCAA TGACCAGGTG CGCTTCGAGC TGTCGGCCTA TGCGCTCAAT
CCCGACATCA AGGTGATCGC GCCCTGGCGC GAATGGGATC TGACCAGCCG CACCGCGCTG
ATCGCGTGGG CCGAACAGCA TCAGATTCCT GTGCCCAAGG ACAAGCGCGG CGAAAGCCCG
TTCAGCACCG ACGCGAACCT CCTCCACACA TCGTCCGAAG GCAAGGTGCT CGAGGATCCA
TGGGAAGAAA CCCCCGACTA TGTCTATTCG CGCACGGTGA ACCCGGAGGA TGCGCCCGAT
ACGCCCGAAT ATATCACGAT CGATTTCGAG CGCGGTGACG GCGTCGCGCT GAACGGGCAG
GCGATGTCGC CCGCGACCCT GCTCGCGGCA CTCAACGACC TGGGCCGCAA GCATGGCATC
GGCCGCCTCG ACCTCGTCGA AAACCGCTTC GTCGGCATGA AGTCGCGCGG CATGTACGAA
ACGCCGGGCG GCGAAATCTA TGCGCGGGCG CATCGCGGCA TCGAAAGCAT CACGCTCGAC
CGCGGCGCGG CGCACCTCAA AGATGAACTG ATGCCCAAAT ATGCCGAGCT GATCTATAAC
GGATTCTGGT TCGCCCCCGA GCGCGAGATG TTGCAGGCGG CGATCGACCA CAGCCAGGCG
AATGTCACCG GCACGGTTCG ATTGAAGCTT TACAAGGGCA ATGCCAGCGT CGTCGGCCGC
AAGTCGCCGT TCAGCCTGTA CAGCGAACGC CATGTGACGT TCGAGGATGA TGCCGGCGCC
TATGACCAGA AGGACGCGGC CGGCTTCATC AGGCTCAACG CGCTGCGGCT CAAACTGCTT
GCCCGACAGG GGCGCTGA
 
Protein sequence
MSDSIKRVVL AYSGGLDTSV ILKWLQVTYG CEVVTFTADL GQGEELEPAR AKAELMGIKP 
EHIYIDDLRE EFVRDFVFPM MRANARYEGD YLLGTSIARP LISKRLVEIA RETGADAVAH
GATGKGNDQV RFELSAYALN PDIKVIAPWR EWDLTSRTAL IAWAEQHQIP VPKDKRGESP
FSTDANLLHT SSEGKVLEDP WEETPDYVYS RTVNPEDAPD TPEYITIDFE RGDGVALNGQ
AMSPATLLAA LNDLGRKHGI GRLDLVENRF VGMKSRGMYE TPGGEIYARA HRGIESITLD
RGAAHLKDEL MPKYAELIYN GFWFAPEREM LQAAIDHSQA NVTGTVRLKL YKGNASVVGR
KSPFSLYSER HVTFEDDAGA YDQKDAAGFI RLNALRLKLL ARQGR