| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0489 |
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| Symbol | |
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| ID | 4081379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 505224 |
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| End bp | 506933 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008847 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_615543 |
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| Protein GI | 103485982 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.248205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAG CGCTCGATTT GCGCCTGGAA GCCGCCTATA ATCTGATCAC CGGTCCCGGC
GGACCGATCC AGGTCGGGTC GGTCGAACGC TTTGGCCGCC AGCTGCCCTT CATCACCAAC
GCGCCAACCA ACCTCGCCGA CTATGTCGCC TATTTCGCGA TGCAGCACGG CGACGCGACC
TTTCTGGTCG AGGGCGACGA ACGCCTGTCG TTCAAACAGG TCTATATGGC GGCGCGGCAG
GTCGCGGCGG GGCTGATCGA GGGTTTCGGC GTCGAGCGCG GCGACCGGGT GGGTCTGGCG
ATGCGCAACG CGAATGCGTG GTGCGTCGCC TATATCGGCA TTTTGATGGC GGGCGGCTGC
GCGACGCTGC TGAATGGCTG GTGGCAGGGC GGCGAGCTCG CCGCGGGCAT CGAGAACAGC
GAGGCGAAGC TGGTCATTGC CGATCCGCAG CGCGCGGCGC GGCTGGCCGA ACCGGGGGTT
GAGCATGGCG CGAAGGTCGT GACGCTCGAC ATCACCCGGC CCATCGACGA AGCGATCGCG
CCGATTGCGT CAAAGGGAAG CGCCGCAACG GTGCTGCCGA CGCTCACCGG ACAGGATCTC
GCGACGATCC TTTTCACCTC GGGCTCGACC GGCCAGTCGA AGGGGGCCTA TTCGCGCCAC
GAGGCGGTGG TGCAGGCGAT CTTCAACTAT GTCACGCAGA CCGCGACCAT CGTCCATCTG
CTGACCGAGG ACGGGCAGAT GTCCGACATC CAGCCCGCGA CGCTGATCTG CACCCCACTG
TTTCACGTCA CCGCCGAAAT CCCGGTGTTC CTGCAAAGCT TCGCGCTCGG GCGAAAACTG
GTGCTGATGC CCAAATGGAA CGCCGAAGAG GCGATGCGAC TGATCCAGGA CGAACAGGTC
AATTATTTCG TCGGCGTCCC GCTGATGAGC TATGAGATCC TCACCCATCC GAACCGCAAG
AATTACGACC TGTCGACGTG CAAAAGCTAT GCCGGCGGCG GCGCGCCGCG TCCGCCCGAG
CATGTGAAGC GTCTCGCCAC CGAAATGGGC GAGGCGAAGC CCTTGCTCGG CTATGGCCTC
ACCGAAACCA ACGCCGTCGG CTGCGGCATC ATCAACGAAA ATTACGTCGC CAAGCCGCTG
TCGACCGGCC CCGCGTCGAA GCCGCTCGTC GATCTGGCGA TCCTCGACGA CAATGGCGAT
CCGGTGCCGC AGGGCGGCAT CGGCGAAGTC TGCATCCGCT CGGTCGCCAA TTTCGAAGGC
TATTGGAACA ATGAGGCGGC GACCAGGGCG GCCTTTTTCG ACAATGGCTA TTTCCGCACG
GGCGACCTCG GCTATCTCGA CGAGGACGGA TATCTCTTCA TTGTCGACCG CAAGAAGGAC
ATCATCATCC GCGGCGGCGA GAATATCAGC TGCCAGGAAG TCGAGGCGGC GATCTATGAG
CATCCCGAAA CGAACGAATG CGCGGTGTTC GGGCTGCCCG ACGAGCGGCT CGGCGAAGTC
GTCGGAGCGG TGATCTGGAT GAAGCCCGGA AGCGGCGTGA CCGCCGACGC CATGTGCTCC
TTCCTCAGCG CGCGGCTCGC GCCCTACAAG GTGCCGTACA AGATCTGGAT GTCGAACGAG
GCGCTGCCCA AGCTCGGCAG CGAAAAGATC GACAAGGTCA GCCTGCGCAG CCAGTATCGC
GAAGCCTATG CGGCGGAGGT CGTCGCGTAA
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| Protein sequence | MPSALDLRLE AAYNLITGPG GPIQVGSVER FGRQLPFITN APTNLADYVA YFAMQHGDAT
FLVEGDERLS FKQVYMAARQ VAAGLIEGFG VERGDRVGLA MRNANAWCVA YIGILMAGGC
ATLLNGWWQG GELAAGIENS EAKLVIADPQ RAARLAEPGV EHGAKVVTLD ITRPIDEAIA
PIASKGSAAT VLPTLTGQDL ATILFTSGST GQSKGAYSRH EAVVQAIFNY VTQTATIVHL
LTEDGQMSDI QPATLICTPL FHVTAEIPVF LQSFALGRKL VLMPKWNAEE AMRLIQDEQV
NYFVGVPLMS YEILTHPNRK NYDLSTCKSY AGGGAPRPPE HVKRLATEMG EAKPLLGYGL
TETNAVGCGI INENYVAKPL STGPASKPLV DLAILDDNGD PVPQGGIGEV CIRSVANFEG
YWNNEAATRA AFFDNGYFRT GDLGYLDEDG YLFIVDRKKD IIIRGGENIS CQEVEAAIYE
HPETNECAVF GLPDERLGEV VGAVIWMKPG SGVTADAMCS FLSARLAPYK VPYKIWMSNE
ALPKLGSEKI DKVSLRSQYR EAYAAEVVA
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