Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0479 |
Symbol | |
ID | 4080527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 495047 |
End bp | 495988 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638008837 |
Product | hypothetical protein |
Protein accession | YP_615533 |
Protein GI | 103485972 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0772873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACTC GCTCGAACAA CATCCTCGTC GGCGCCTTTG TGCTGCTTTT CACCGCCGCG CTCGCCTTTT TCGTCGTCTG GCTGGCGAAC GACAGCGGCG GGGCGAAGCG CGAATATGAC ATTTTCTTCA AACAATCGGT CGACGGGCTG AACAAGGGCG CGCAGGTGCA ATTTTCGGGT GTGCCGTCGG GACAGGTGCG CGAGATCGCA CTGTGGCCCG ACGATCCGCA ATTCGTCCGC GTGCGGATCG AGGTGAATGA AGGCGTACCC GTCCTGCAAG GCACGACCGC CGCGCTTGAG GGCGTCGGCT TCACCGGCGT CTCGCAAATC TCGCTCGACG GCGCGGTCAA GGGCGCACCG CCGATTACCG ACAAGGGGCC GGCAGGCAAG CCGGTGATCC CGACGCGCGT TGGCGGGCTC GGCGAGATAC TCAACACCGC GCCGCAACTG CTCCAGCGGC TGTCGACGCT CACCGAGCGG CTCGCCGAGC TGGCCGACGA CGAGAATCAG GCGAGCATCC GCGGCATTCT CAACAATGTC GAGGCGTCGA CCGCGATCCT CGCGCGCAAC GGCCCCGCGA TCGAGCGCGC GCTCGCCGAC ACGCGGATCG CGATCCAGCA GACCGGGATC GCCGCCGAGC AGATCGGCAA TCTCGCGGCC GCGGCGCAGG GGACGATCGA CCGCAACGTC GACCCTGCGA TGGCCAATCT GCGCGACACG CTCAAATCGG CGAACGCCTC GATGAAGACG CTCGAAGGCG CGATCGCCGA CGCGCGGCCC GGCCTCAAAA CCTTCAGCGA GACGACGATC CCCGAAGCCA ATGCGCTGAT CCGCGACCTT CGCCGCACCT CGGCCTCGCT CTCCAGCCTG ACCGACAAGC TCGACCAGCA GGGCGCGGGC GCGGTGCTCG GTGGCAGCAA GCTCCCCGAT TACAAGGAAT GA
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Protein sequence | METRSNNILV GAFVLLFTAA LAFFVVWLAN DSGGAKREYD IFFKQSVDGL NKGAQVQFSG VPSGQVREIA LWPDDPQFVR VRIEVNEGVP VLQGTTAALE GVGFTGVSQI SLDGAVKGAP PITDKGPAGK PVIPTRVGGL GEILNTAPQL LQRLSTLTER LAELADDENQ ASIRGILNNV EASTAILARN GPAIERALAD TRIAIQQTGI AAEQIGNLAA AAQGTIDRNV DPAMANLRDT LKSANASMKT LEGAIADARP GLKTFSETTI PEANALIRDL RRTSASLSSL TDKLDQQGAG AVLGGSKLPD YKE
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