| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0343 |
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| Symbol | |
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| ID | 4081041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 345792 |
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| End bp | 348227 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008702 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_615399 |
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| Protein GI | 103485838 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG1142] Fe-S-cluster-containing hydrogenase components 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0783507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC CGGTCAAGGT TGCGATCATC GGATCGGGCC CGGCGGGGCT GAGCGCGGCC
GCGCGCGCGG CGCAGCTGGG GATGAGTCAC GTCCTGCTCG AAAAGACCGA CCATCTGTCG
GACACCATCT TCAAATATCA GAAGGGCAAG CGCGTGCTGG CGACGCCCGA GCGACTCGAC
CTCCGCTCCG ACTGCCGCTT TGCCGAAGGC GCACGCGAGC AGATTCTCGC GAATTGGGAC
GAGGACGCCG CGAACAACAA GGTCAATGTG GCATATCGTG CCGATGTCGC CGAAGTGACC
GGCGAGAAGG GCGCGTTCGC GATCAGGACG GCGAAGGGCG ATGTGTTTCA CGCCGAAAAT
ATCGTGCTGG CAATCGGTAC GCAGGGCAAT CCGAACCGGT TGCGCTGCGA GGGATATGAC
CTGCCGCACA TCATCTATCA GGTCGACGAT CCCGAGGATT TCAGGGACAA GCATATCACC
GTCGTCGGTT CGGGCGACGC CGGCATCGAA AATGCGCTGG GGGTGGCCGA GGAGGCGCTG
GAAAACACCG TCACCATCCT GAACCGGTCC AGGGATTTCG CGCGCGCCAA GGCCAAGAAT
GTATCCGACC TGATGGAAGC GGCCGAAAAC GGGCTCATTT CGATCCGTAC CGAGACGCAG
CCGAAAAAGG TCGAACCGGG CTGGCTGACG CTCGACACCC CCGATGGCGA GGAACGCATT
CCCTGCGACG TCATCGTCGC GCGGCTGGGC TCGGTCGCGC CGCGGGCTTT CGTCGAATCG
ATGGGGATCG AGTTCACCGG CCCCGACCGC GAGGCCTTTC CCAAGCTGTC GCCGACCTTT
GAATCGACGG TGCCCGGCAT TTTCGTCATC GGCGCGCTCG CGGGCTATCC GCTGATCAAG
CATTGCATGA ACCAGGGCTA TGACGTCGTC GAGTTCATCA ATGGCAACAT GGCGCTGACC
CCCGCCGACG AAAAGGATCT GGCGGCGATA TTTGCGGGCC TGCCGCAGCA GAAGCCGGTG
AGCGAATGGC TCGACTATCT GCGCGAACGG GTGAGCATCT TTGCCGATGT GTCGCCGCTG
CAGATGCGCG AGTTCATGCT CGATTCGAAG GTCGCTTTCT ATCGCAAGGG CGAGGTGGTG
TTCGAAAAGG GCGAGCCGGG ATCGTCGCTG TTCGCCATCG CCGACGGCCA CGCCGAGGTC
GAGGTCGGTC CCGGCGCCAC CGTGCCGATC GAACAGGGAT CGATTTTCGG CGAGGTCGGG
CTGATTTCGG GGCGCAAGCG CGGCGCGACG ATCCGCGCGG GCGCCGACAG CATCTTCGTC
GAGGTGTCGC GCACCGCGGC GCTCAAGCTG ATGGCCGCGG TCCCCGGCGC CAGGCGCGCG
ATCAACCGCA TCTCGCTCGA ACGCCAATTG TTGCAAATCT TCAAGGGCGG GCTGACCGCC
GAGGATCTGG CGCCGGTCGT CGAGGCGGCG GAGGTCGAGC GCGTACCCGC GGGCAAGGCC
GTGCTGATCG AGGGCGAGCA GGGCGACGAC GTTTACGTCA TCCGCTCGGG ATCGATGGTG
GTCGAGAAGG ACATCGGCGG CAAGCCGATC TTCCTGCGCT ACCTGCCCGC CGGCAGCTTT
TTTGGCGAAA TGGGCGTGCT GAGCGGCGAG CCGCGCAACG CGACGGTCAA GGCCGCGGTC
GGCAGCGAGG TGATCAAGCT GACCGGCGAC AGTTTCCGCA AGATGCTCGC GGCGCGGCCG
CAGGTGCGCG AAGCGACCGA GGCCGCGGTG GCCGAGCGCG CCGCGATGAA CAGCTTCATC
GAATCGCGCA AGGCGAGCTA TTCGAGCGCG GTCGACCTCT ATTCGGACAC CGCGAGCTTC
ATCATGAAGG AGGGGCTGGG CGAGGCGACC GACGCGCTGC TGATCGACGA GAATCTGTGC
GTCGGCTGCG ACAATTGCGA AAAGGCGTGT GCCGACAGCC ACGAAGGGCT GTCGCGGCTC
GACCGCGAGG CGGGCAAGAC CTTCGCCCAC CTGCACGTCC CCACGAGCTG CCGCCACTGC
GAGCATCCGC ACTGCATGGC CGACTGTCCG CCGAACGTCA TCCACCGCGG CCCCGATGGC
GAGGTGTTCA TGGAGCCGGG CTGCATCGGC TGCGGCAACT GCATGCGCAA CTGCCCCTAT
GGCGTGATTC GCATGGAAGC GGCGCCGCCG CCCAAACCGG GGCTTTTGAG CTGGCTGCTG
CTCGGGCGCG GGCCGGGGCC GGGCGAACCC TCGCCCAAAT GGACCAAGAA GCAATTAGGC
GACGAGAAAC CCAAGAAGAT CGCGGTCAAA TGCGACATGT GCAAGGGCAT CGCCGGCGGC
CCGGCGTGCG TGCGCGCCTG TCCGACGGGG GCGGCGATCC GCGTGTCGCC CGAAGAGTTT
CTGTCGATCG CGCGGCTGGG CGAGGCGACC GACTGA
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| Protein sequence | MSEPVKVAII GSGPAGLSAA ARAAQLGMSH VLLEKTDHLS DTIFKYQKGK RVLATPERLD
LRSDCRFAEG AREQILANWD EDAANNKVNV AYRADVAEVT GEKGAFAIRT AKGDVFHAEN
IVLAIGTQGN PNRLRCEGYD LPHIIYQVDD PEDFRDKHIT VVGSGDAGIE NALGVAEEAL
ENTVTILNRS RDFARAKAKN VSDLMEAAEN GLISIRTETQ PKKVEPGWLT LDTPDGEERI
PCDVIVARLG SVAPRAFVES MGIEFTGPDR EAFPKLSPTF ESTVPGIFVI GALAGYPLIK
HCMNQGYDVV EFINGNMALT PADEKDLAAI FAGLPQQKPV SEWLDYLRER VSIFADVSPL
QMREFMLDSK VAFYRKGEVV FEKGEPGSSL FAIADGHAEV EVGPGATVPI EQGSIFGEVG
LISGRKRGAT IRAGADSIFV EVSRTAALKL MAAVPGARRA INRISLERQL LQIFKGGLTA
EDLAPVVEAA EVERVPAGKA VLIEGEQGDD VYVIRSGSMV VEKDIGGKPI FLRYLPAGSF
FGEMGVLSGE PRNATVKAAV GSEVIKLTGD SFRKMLAARP QVREATEAAV AERAAMNSFI
ESRKASYSSA VDLYSDTASF IMKEGLGEAT DALLIDENLC VGCDNCEKAC ADSHEGLSRL
DREAGKTFAH LHVPTSCRHC EHPHCMADCP PNVIHRGPDG EVFMEPGCIG CGNCMRNCPY
GVIRMEAAPP PKPGLLSWLL LGRGPGPGEP SPKWTKKQLG DEKPKKIAVK CDMCKGIAGG
PACVRACPTG AAIRVSPEEF LSIARLGEAT D
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