| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0328 |
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| Symbol | tolB |
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| ID | 4082359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 333811 |
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| End bp | 335175 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008687 |
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| Product | translocation protein TolB |
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| Protein accession | YP_615384 |
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| Protein GI | 103485823 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGC GTCCGATCAG CCTAATGCTC GCCCTGCTGC TGACCAGCGC ACCAGCGCTC
GCCCAGTCCG CCCCGACGCC GCCCGCGACA GTGCAGACCG AACCGCGCGA GACGATCGAG
GGCACGCTGT CGCAGGAACG CACGGTCATC GGCATCCCGT CCTTCGCCAC CGCCTCGGTC
CAGACCGTCG CGGGGCTGCG CACCGACGCC CTCGGCCGCC AGCTTGCCGA CGTCATCGCC
GCCGACCTGG AACGCAGCGG CCTCTTTGAA CCGATCGGCC CGAACGGCGT CCGCGCGATC
GGCCGCGCCG AGGTGCAGGC GCCGCGCTTT GGCGAATGGC AAGCGCGCGG CGCCGAAAAT
GTCGTCCACG GCTTTGTCGA TGCCGGATCG AACGGCAGCC TGATCGTCGG CTGTTACCTC
TATGATACGG CGCTGGGCAG CGAACTGGTG CGCAAGGGGT TCGAGATACA GCCCGCCGAC
TGGCGCCGCG CCGCGCATAA ATGCGCCGAC GCCATCTATT CGCGCCTGTC GGGCGAGGCG
CCCTTCTTCG ACAGCCGCGT CGCCTATATC GCCGAGAGCG GGCCCAAGGG GAACCGCATC
AAACGGCTCG CGATCATGGA TTCGGACGGC GGCAATCACC GCTTCATCAC CAACGGTCAG
GCGCTGGCGC TCAGTCCGCG TTTTTCACCG GATTACAAGA AGATCGTTTA TGTCAGCTAT
TTGAATGACC GGGTTCGCGT CTTCATCTAT GACGTTGCGT CGGGGACACA GCGGCTGGTG
ACTGAAAGCC GCAATCCGAC CTTTGCCCCG CGCTGGTCGC CCGACGGGAC GCAGATCCTC
TATTCGATGG CGGTCGGCGG CAACACCGAC ATCTATCGCA TTTCGGCGAA CGGCGGCACG
CCGGTGCGAC TGACCACCGC GCCGGGGATC GACGTCGGCG GCAGCTTTTC GCCCGACGGG
CGCAAGATCG TGTTCGAAAG CGACCGGTCG GGCAGCCAGC AGCTTTATGT GATGAACATT
GACGGGTCGA ACCAGCAGCG GATCAGCTTT GGCGGCGGAC GCTATGCCAC CCCTGAATGG
TCGCCGCGCG GCGACCTGAT CGCCTTCACC CGCATGGGCG GCGGCGAGTT TCGCATCGGC
GTGATGACGC CGTCGGGCGG TGGGGTGCGG ATGCTGACGA ACGGCTGGCA GGACGAGGCG
CCGACCTGGT CGCCGAACGG CCGCGTCATC CAGTTCTTCC GCACCACGCC GGGCCGCGAG
GGCAGGTCCA GCCTGTGGCA GGTTGACCTG ACCGGCGTGA ACCTGCGCCG CCTGCCGACC
CCGCAGGACG GATCGGACCC CAGCTGGGGG CCGGTTCTGC CTTGA
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| Protein sequence | MSLRPISLML ALLLTSAPAL AQSAPTPPAT VQTEPRETIE GTLSQERTVI GIPSFATASV
QTVAGLRTDA LGRQLADVIA ADLERSGLFE PIGPNGVRAI GRAEVQAPRF GEWQARGAEN
VVHGFVDAGS NGSLIVGCYL YDTALGSELV RKGFEIQPAD WRRAAHKCAD AIYSRLSGEA
PFFDSRVAYI AESGPKGNRI KRLAIMDSDG GNHRFITNGQ ALALSPRFSP DYKKIVYVSY
LNDRVRVFIY DVASGTQRLV TESRNPTFAP RWSPDGTQIL YSMAVGGNTD IYRISANGGT
PVRLTTAPGI DVGGSFSPDG RKIVFESDRS GSQQLYVMNI DGSNQQRISF GGGRYATPEW
SPRGDLIAFT RMGGGEFRIG VMTPSGGGVR MLTNGWQDEA PTWSPNGRVI QFFRTTPGRE
GRSSLWQVDL TGVNLRRLPT PQDGSDPSWG PVLP
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