Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0309 |
Symbol | |
ID | 4082872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 313173 |
End bp | 314231 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638008667 |
Product | putative lipoprotein signal peptide |
Protein accession | YP_615365 |
Protein GI | 103485804 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.45814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGGC TTCGCGCACC CCTGCGGCTG GCTTTGCTGC TCATGCTGCT CTGCGCCGCC CCGACGGTGT GGGCCGGGCC GTTCGTCGGA CAACGCCTGA TGACCGCCGA CCACCCGCCG GCCGCCGCGC GCAACGCCGA CGGCAGTACG CGGCTGCGCG TCACCGTCTG GTATCCCGCA GCAGGCGATG ACGGCGCCGG CACTGCGCCG CCCGTCGTGC GCGACGCCCC CCCTGCCGCC GGGGGGCGCC GCGGCGTCAT CCTCCTCTCG CACGGCTTCG GCGGCGCGGC GGTGGCGATG GGCTGGTTCG CCAGGACAAT GGCCGAGGCG GGCTATGTCG TGATCGGCGT CGACCATCCG GGCAACAATG GGCTGGAGGC GATGACCAAA GCAGGCGCTG CGCTCTTCTT CGAACGCCCC GGCGATCTGC GGCGGGCCTT TGACCATGTC GCCGCCGACC CCGTGCTTGG CCCGATGCTC GACCCCGGCC GCGTCGCTGC CGCGGGTTTT TCGGCGGGCG GTTTCACTGC GCTCGCGCTG GGCGGCGCGC GCATGGAGAC AGGACTGCTG CGCCGTTTCT GCACCGCCAA CCCCGATGAT GGCGTCTGCC GCCCGCAGCT CGAGTTTGCG GTCCCCATCG ACGAGGTGCT GGCGATGCTG GACGGCGAAA GCGCCCGCGC CCGGCTGGCG GAGATCGCCG CCACGCCGCC GCGGCCGCGC ATCCGCGCGC TGCTCGTCAT GGCACCTGCG ATCGTGCAGG CCTTCGATCC CGCCAGCCTC GCCGCGATTG ATGTCGAAAC GCGGCTGATC CTCGGCGGAG CGGACAGCGT GACGCCGAAC GCGACCAACG GCCTCGCCGT CGCGGCATTG GTGCCCCGTG CGCATCATCA GACCATCCCC GACGCCGGTC ATTATGATTT CCTGACCGCC TGCGCCGCGG ACGCGCCCAA CCCCCTCCCC TTTTGCGCGC ACCAGCGCCA GACCGCCGCA GCGCATCGCG CCGCGATCAC CGCCGCGCTC GACCTCTTCG CGCGGACGAT CGGCGCGCGT ACAGAATAA
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Protein sequence | MTGLRAPLRL ALLLMLLCAA PTVWAGPFVG QRLMTADHPP AAARNADGST RLRVTVWYPA AGDDGAGTAP PVVRDAPPAA GGRRGVILLS HGFGGAAVAM GWFARTMAEA GYVVIGVDHP GNNGLEAMTK AGAALFFERP GDLRRAFDHV AADPVLGPML DPGRVAAAGF SAGGFTALAL GGARMETGLL RRFCTANPDD GVCRPQLEFA VPIDEVLAML DGESARARLA EIAATPPRPR IRALLVMAPA IVQAFDPASL AAIDVETRLI LGGADSVTPN ATNGLAVAAL VPRAHHQTIP DAGHYDFLTA CAADAPNPLP FCAHQRQTAA AHRAAITAAL DLFARTIGAR TE
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