| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0289 |
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| Symbol | |
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| ID | 4082649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 286755 |
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| End bp | 287768 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638008647 |
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| Product | putative mRNA 3-end processing factor |
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| Protein accession | YP_615345 |
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| Protein GI | 103485784 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.640549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGG CGACGACGTG GATCGAGCCG CATCCGGGCG GCATCTATGT GAAGCCCGCC
GACCTGTGGA TTGACCCGTC GCGCCCTGTC CCCCGCGCCG CGGTGACGCA CGGTCATGCC
GATCATGCGC GCAGCGGCCA CGGTGCGGTG TTCGCGACCC CCGAGACGTT GGCGATCATG
GCGCTGCGCT ATGGCGTCGA CGTTGCGGCG AGCCATAACC GGGGGTTCGC CTATGGCGAG
GGGTTCGAGC GCGGCGGCGT GCGTTTTTCC TTCCATCCCG CGGGGCATGT GCTCGGCAGC
GCACAGATAT TGATGGAATA TCGGGGCGAA CGGATCGTCG TCACCGGCGA TTACAAGCGC
CGCGCCGACC CCACCTGCGC GGCGTTCGAG GTGGTGCCGT GCGACATCTT CATCACCGAG
GCGACCTTCG GCCTGCCGGT GTTCCGCCAT CCGCCGACAC AGGGCGAGAT CGCCAAGCTG
ATCGACGCGG TGCGCGCCGA ACCCGACCGC TGCGTCCTCG TCGGCGCCTA TGCGCTCGGC
AAGGCACAGC GCCTGATCGC CGAACTGCGC GGCGCGGGAT GGGATGCGCC CATCTATATC
CACGGCGCGC TCGAGAAGAT GTGCACGCTT TATGCGGTGC ACGGCGTCGA TCTCGGCGAA
CTTCGGCTCG TCTCGGAAAC CGACAGGGCC GACATGGCGG GGCAGATCGT CGTCGCGCCG
CCCGCCGCCC TCAACGACCG CTGGTCGCGG CGCTTGCCCG ATCCGTTGAC CGCGATGGCG
TCGGGCTGGA TGCGCGTGCG CCAGCGCGCG CGGCAGCGGA TGGTCGAACT GCCGCTCGTC
ATCTCGGACC ACGCCGACTG GGACGAACTG ACGACGACGA TTGCTGAGGT GAACCCCAAG
GAGACATGGA TCACCCACGG CAGCGAGGAC GGTTTGCTGC GCTGGTGCGA ATTGCATCAG
CGTCAGGCGC GCGCGCTGCA CCTCGTCGGT CGCGATCTGG AGGAAGAGGC GTGA
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| Protein sequence | MARATTWIEP HPGGIYVKPA DLWIDPSRPV PRAAVTHGHA DHARSGHGAV FATPETLAIM
ALRYGVDVAA SHNRGFAYGE GFERGGVRFS FHPAGHVLGS AQILMEYRGE RIVVTGDYKR
RADPTCAAFE VVPCDIFITE ATFGLPVFRH PPTQGEIAKL IDAVRAEPDR CVLVGAYALG
KAQRLIAELR GAGWDAPIYI HGALEKMCTL YAVHGVDLGE LRLVSETDRA DMAGQIVVAP
PAALNDRWSR RLPDPLTAMA SGWMRVRQRA RQRMVELPLV ISDHADWDEL TTTIAEVNPK
ETWITHGSED GLLRWCELHQ RQARALHLVG RDLEEEA
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