Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0252 |
Symbol | |
ID | 4083110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 255275 |
End bp | 255820 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008610 |
Product | GrpE protein |
Protein accession | YP_615308 |
Protein GI | 103485747 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.243208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAATG ACACGCCGGT CGACGACGGC CAGACCGACG ACGCCGCAAC CGAAACCGAA ACCGCGGCGA CCGAACCGCA GGACGAGGCG GCGAAGCTCG CCGAACAGCT CGCCGCGGTG CAGCAGGATT TGCTCTATGC GCGCGCCGAG ACGCAGAATG TCCGCCGCCG CGCCGAGAAG GAAGTCGCCG ACGCGCACGC CTATGCCGCG ACCAGGTTCG CGCGCGATAT CCTCTCGGTC GCCGACAATC TGGGCCGCGC ACTCGCTGCG CTGAGCGACG AACAGCGCGC GGACGAGGCG ATCAAGCCGC TGGTGACGGG GCTGGAAGCG ACCGAGCGCG AACTGATGGC GGTGTTCGAA CGCCATGGCA TCACGCGCAT CGCCGCGATC GGCCTGCCGC TCGACCCCAA CCAGCATCAG GCGATGCTCG AAATCCCCAG CGACAAGGAA CCCGGCACGA TCGTGCAGGA AATGCAGGCG GGCTATATGA TGAAGGACCG GCTGCTGCGG CCCGCCATGG TGGCGGTGGC GAAGAAGGCG GAGTAG
|
Protein sequence | MENDTPVDDG QTDDAATETE TAATEPQDEA AKLAEQLAAV QQDLLYARAE TQNVRRRAEK EVADAHAYAA TRFARDILSV ADNLGRALAA LSDEQRADEA IKPLVTGLEA TERELMAVFE RHGITRIAAI GLPLDPNQHQ AMLEIPSDKE PGTIVQEMQA GYMMKDRLLR PAMVAVAKKA E
|
| |