Gene Sala_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0252 
Symbol 
ID4083110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp255275 
End bp255820 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content67% 
IMG OID638008610 
ProductGrpE protein 
Protein accessionYP_615308 
Protein GI103485747 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.243208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG ACACGCCGGT CGACGACGGC CAGACCGACG ACGCCGCAAC CGAAACCGAA 
ACCGCGGCGA CCGAACCGCA GGACGAGGCG GCGAAGCTCG CCGAACAGCT CGCCGCGGTG
CAGCAGGATT TGCTCTATGC GCGCGCCGAG ACGCAGAATG TCCGCCGCCG CGCCGAGAAG
GAAGTCGCCG ACGCGCACGC CTATGCCGCG ACCAGGTTCG CGCGCGATAT CCTCTCGGTC
GCCGACAATC TGGGCCGCGC ACTCGCTGCG CTGAGCGACG AACAGCGCGC GGACGAGGCG
ATCAAGCCGC TGGTGACGGG GCTGGAAGCG ACCGAGCGCG AACTGATGGC GGTGTTCGAA
CGCCATGGCA TCACGCGCAT CGCCGCGATC GGCCTGCCGC TCGACCCCAA CCAGCATCAG
GCGATGCTCG AAATCCCCAG CGACAAGGAA CCCGGCACGA TCGTGCAGGA AATGCAGGCG
GGCTATATGA TGAAGGACCG GCTGCTGCGG CCCGCCATGG TGGCGGTGGC GAAGAAGGCG
GAGTAG
 
Protein sequence
MENDTPVDDG QTDDAATETE TAATEPQDEA AKLAEQLAAV QQDLLYARAE TQNVRRRAEK 
EVADAHAYAA TRFARDILSV ADNLGRALAA LSDEQRADEA IKPLVTGLEA TERELMAVFE
RHGITRIAAI GLPLDPNQHQ AMLEIPSDKE PGTIVQEMQA GYMMKDRLLR PAMVAVAKKA
E