Gene Sala_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0240 
Symbol 
ID4083099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp245964 
End bp246497 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content66% 
IMG OID638008599 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_615297 
Protein GI103485736 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTG AGACCGCCAT TTTTGCCGGA GGCTGCTTCT GGTGCACCGA GGCTGTCTTC 
CAGTCGCTCG CGGGCGTCGA GCGCGTCGAA AGCGGCTATA TCGGCGGCAC CGTCGCCAAT
CCGACCTACA AGCAGGTGTG CGGCGGCGAC ACCGGCCATG CCGAGGCGAT CCGCATCACC
TTCGATCCGG CGGTGATCGG CTATGACGAT CTGCTCGACG TGTTTTTCGC AACGCACGAT
CCGACGCAGC TCAACCGCCA GGGCAATGAC GTCGGCACGC AATATCGCAG CGCGATCTTC
CCGCTCGACG ACGCGCAGGC GGCGGCCGCG CGCAGAGGCA TCGAGCGCGC CGCGCCCGAC
TGGCCGGCGC CGATCGTCAC GACGATCGAA AACGCATCCG AATGGTATCC GGCCGAGGAT
TATCACCAGG CCTATTGGGA GGGCGAAGGG CAGCGCAACC CCTATTGCAT GGCGGTGATC
CCCCCCAAGC TCGCCAAGCT GCGCAAGGGG TTCGCGGAGC GGCTTCGCAA CTGA
 
Protein sequence
MTRETAIFAG GCFWCTEAVF QSLAGVERVE SGYIGGTVAN PTYKQVCGGD TGHAEAIRIT 
FDPAVIGYDD LLDVFFATHD PTQLNRQGND VGTQYRSAIF PLDDAQAAAA RRGIERAAPD
WPAPIVTTIE NASEWYPAED YHQAYWEGEG QRNPYCMAVI PPKLAKLRKG FAERLRN