Gene Sala_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0223 
Symbol 
ID4083003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp231846 
End bp232649 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID638008582 
Productenoyl-CoA hydratase 
Protein accessionYP_615280 
Protein GI103485719 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACC GGATTTCGAT CACCATGCTC GACGGCGGGA TCGCCGACGT CCGGCTGATC 
CGCGCCGACA AGATGAATGC GCTCGACAGC GCAATGTGGG AAGCACTGGC CGAAGCGGTC
GATCAGCTGA AGGCGACGGC GGGGCTGCGC GTCGTCGTCC TGTCGGGCGA GGGGCGCGCC
TTTTGCGCGG GCCTCGACCT TTCGAGCCTC GGCGGCGATC GCGACCCCGG CGCGAGCAGC
GCGGGCGGGG GGCTCGCCGA ACGGACACGG GGCATCGCCA ATAATGCCCA ATATGCCGCC
TGGGGCTGGC GCGAGCTGCC TGTGCCGGTG ATCGCGGCGG TGCACGGCGT CGCCTTTGGC
GCGGGCAGCC AGATCATGGC CGCCGCCGAC ATCCGCATCG TCCACCCCGA CACGCGCATC
GCGATCATGG AGATGCGCTG GGGCCTCGTC CCCGACGTGG CGGGGATGGC GCTGTGGCGC
ACGCAGGTCG CCGACGATGT GCTGCGCGAG CTTGTCTACA CCAACCGCGA GTTCACCGGG
TCGGAGGCGA AGCTGCTTGG CTTTGCGACG CATGTGTCGG ACGACCCGCT GGCCAAGGCG
ATGGAACTCG CCGCGGTGAT TGCCGACAAG AACCCGCACG CGATCCGCGG CGCCAAGCGC
CTCTGCAACA TGCTCGGCGA TGCGAGCGAC GCCGAAATCC TGCAGGCCGA AAGCGACGAG
CAGGTCAAGC TCATCCGCAC CCCGAACCAG ATCGAGGCGG TGATGGCGCA TATGGAAAAG
CGCAGGCCCA ATTTTGTCGA CTAG
 
Protein sequence
MKDRISITML DGGIADVRLI RADKMNALDS AMWEALAEAV DQLKATAGLR VVVLSGEGRA 
FCAGLDLSSL GGDRDPGASS AGGGLAERTR GIANNAQYAA WGWRELPVPV IAAVHGVAFG
AGSQIMAAAD IRIVHPDTRI AIMEMRWGLV PDVAGMALWR TQVADDVLRE LVYTNREFTG
SEAKLLGFAT HVSDDPLAKA MELAAVIADK NPHAIRGAKR LCNMLGDASD AEILQAESDE
QVKLIRTPNQ IEAVMAHMEK RRPNFVD