Gene Sala_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0178 
Symbol 
ID4082287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp181761 
End bp182510 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID638008537 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_615235 
Protein GI103485674 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC TCGTCCCCGT CAAGCGGGTG CTCGATTACA ACGTCAAGCC GCGGGTCAAG 
GCCGACGGCA CGGGCGTTGA CCTTGCGAAC GTCAAAATGT CGATGAACCC GTTCGACGAG
ATCGCGGTCG AAGAGGCGAT CCGCCTGAAG GAAAAGGGCG TCGCGACCGA GATTGTTGCC
GTCAGCATCG GCCCGGCGAA GGCGCAGGAA ACGCTGCGCA CCGCGCTCGC GATGGGCGCC
GACCGCGCGA TTCTCGTCCA GACCGACGAT GCCGTCGAGC CGCTTGCGGT GGCGAAGATC
CTCAAAAGCA TCGCCGACGC CGAACAGCCC GGCCTTGTCA TTCTCGGCAA GCAGGCGATC
GACGACGACA ACAACCAGAC CGGGCAGATG CTCGCCGCGC TCACCGGCTG GGCGCAGGGC
ACCTTTGCCA GCGCGGTCAA TGTCGAGGGC GACCATGTCA GCGTCACCCG CGAAGTCGAT
GGCGGCCTCG AGACGGTGAA GCTGAAGCTC CCCGCGATTG TCACCACCGA CCTTCGCCTC
AACGAGCCGC GCTATGCGTC GCTGCCGAAC ATCATGAAGG CCAAGTCGAA GCCGCTCGAT
GTGAAGGCGC CCACCGATTA TGGCGTCGAC ACGACGCCGC GCGTCAAGAC GCTCAAGGTC
TCCGAACCGC CGGTTCGCCA GGCCGGTATC AAGGTCGCCG ATGTCGATGA ACTGGTTGCC
AAGCTCAAGG CGATGGGCGT CCACAGCTAA
 
Protein sequence
MKILVPVKRV LDYNVKPRVK ADGTGVDLAN VKMSMNPFDE IAVEEAIRLK EKGVATEIVA 
VSIGPAKAQE TLRTALAMGA DRAILVQTDD AVEPLAVAKI LKSIADAEQP GLVILGKQAI
DDDNNQTGQM LAALTGWAQG TFASAVNVEG DHVSVTREVD GGLETVKLKL PAIVTTDLRL
NEPRYASLPN IMKAKSKPLD VKAPTDYGVD TTPRVKTLKV SEPPVRQAGI KVADVDELVA
KLKAMGVHS