Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0090 |
Symbol | |
ID | 4082065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 94088 |
End bp | 94663 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638008451 |
Product | MarR family transcriptional regulator |
Protein accession | YP_615149 |
Protein GI | 103485588 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0236682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGTCTA TGCCCCGCGC ACATATAGAC GCGCCGATGG ATGGACCTCG AGACCGCAAT ATATTTGGGG CGTTCGCACT GATGATCAGC GACGACATCG TTCGCGCTAG TTCATCGCGG GCACCGGAAG CTGGCCCCGC CGCCTCAGCG CTGGCGCTAC TCGCGCACCA GCCCGGGCTC TCGATCCGCA TGCTTGCGGT CGGGGTAGGC CTTTCCCATG CAGGGACGGT TCGCCTGGTG GATCGATTGG CTACCGAGGG ATTGATCGAA CGCAGGGAGC ATTCGTCAGA TGGGCGCACG CGGGCCCTCT ACCTCACTCC AACCGGAAAG ATTGCGAGCG ACGAGGTTCT TGCTTCGCGC GACGAGGTGA TTGCCGAAGG ATTATCGATC CTGAAGCCCG ACGAACTGAA AATCCTATGC GACATGGCTG AACGCGTCCT GCGCGATCGC CTGGAAAACC TGGAGCATTC CTACCGCATC TGCCGCCTGT GCTGCTATGA AGGCTGCACC AACTGCCCCA TCGACGCCGA ATTGCACGAA CGGGGGGTGG AACGCGGGAA AAGTGGCGAC GGGTAG
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Protein sequence | MLSMPRAHID APMDGPRDRN IFGAFALMIS DDIVRASSSR APEAGPAASA LALLAHQPGL SIRMLAVGVG LSHAGTVRLV DRLATEGLIE RREHSSDGRT RALYLTPTGK IASDEVLASR DEVIAEGLSI LKPDELKILC DMAERVLRDR LENLEHSYRI CRLCCYEGCT NCPIDAELHE RGVERGKSGD G
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