Gene Sala_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0090 
Symbol 
ID4082065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp94088 
End bp94663 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content61% 
IMG OID638008451 
ProductMarR family transcriptional regulator 
Protein accessionYP_615149 
Protein GI103485588 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0236682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGTCTA TGCCCCGCGC ACATATAGAC GCGCCGATGG ATGGACCTCG AGACCGCAAT 
ATATTTGGGG CGTTCGCACT GATGATCAGC GACGACATCG TTCGCGCTAG TTCATCGCGG
GCACCGGAAG CTGGCCCCGC CGCCTCAGCG CTGGCGCTAC TCGCGCACCA GCCCGGGCTC
TCGATCCGCA TGCTTGCGGT CGGGGTAGGC CTTTCCCATG CAGGGACGGT TCGCCTGGTG
GATCGATTGG CTACCGAGGG ATTGATCGAA CGCAGGGAGC ATTCGTCAGA TGGGCGCACG
CGGGCCCTCT ACCTCACTCC AACCGGAAAG ATTGCGAGCG ACGAGGTTCT TGCTTCGCGC
GACGAGGTGA TTGCCGAAGG ATTATCGATC CTGAAGCCCG ACGAACTGAA AATCCTATGC
GACATGGCTG AACGCGTCCT GCGCGATCGC CTGGAAAACC TGGAGCATTC CTACCGCATC
TGCCGCCTGT GCTGCTATGA AGGCTGCACC AACTGCCCCA TCGACGCCGA ATTGCACGAA
CGGGGGGTGG AACGCGGGAA AAGTGGCGAC GGGTAG
 
Protein sequence
MLSMPRAHID APMDGPRDRN IFGAFALMIS DDIVRASSSR APEAGPAASA LALLAHQPGL 
SIRMLAVGVG LSHAGTVRLV DRLATEGLIE RREHSSDGRT RALYLTPTGK IASDEVLASR
DEVIAEGLSI LKPDELKILC DMAERVLRDR LENLEHSYRI CRLCCYEGCT NCPIDAELHE
RGVERGKSGD G