Gene Sala_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0086 
Symbol 
ID4082061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp90499 
End bp90834 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content58% 
IMG OID638008447 
Producthypothetical protein 
Protein accessionYP_615145 
Protein GI103485584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.421423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.335863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAA ATGTCGCAGG GCTGCTCCCC GAAAGGCGGC TCGACCGCGC CGATCGCGCG 
AAAACGACTG ACCACCCGCC GCCGGCATCA AAAAACCATG TTGAAGCCAT AGAGGTGGAG
AGCGAGCGTC ACCCAGACAA ACGTGACCCC AGCGAGGACC AGCAAAGTCG CGCCGAGCTT
CACAGTCCAT CGGCGCTTGT CCCTGATACT CAGCAAGAGA TGCCAGAATG CTGTCGCGAG
CAAGTAGCGG CAGATCCGCT CTTTCGTGTA GATTCGCGTA TAGAGCACTT ATTCCGCCCA
CATGGCATTG AACCGCTGGA TGGACATATC TGCTGA
 
Protein sequence
MPRNVAGLLP ERRLDRADRA KTTDHPPPAS KNHVEAIEVE SERHPDKRDP SEDQQSRAEL 
HSPSALVPDT QQEMPECCRE QVAADPLFRV DSRIEHLFRP HGIEPLDGHI C