| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0083 |
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| Symbol | |
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| ID | 4082058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 87851 |
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| End bp | 88753 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008444 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_615142 |
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| Protein GI | 103485581 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.670509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.78955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGC TGGACGCCAT GCGGGTCTTA TTGGCGGTCG TCGATGCCGG CAGCCTGTCA
GCCGGAAGCC GCGCGCTTGG ATCTCCTTTG CCCAGCGTCA GTCGTAAGGT TGCCGAACTC
GAGCGCTACC TTGGAACCAA TCTGCTCGTC AGGACGAGCC GCAACATTCA GTTGACCGAC
GCGGGCCGCG ACTATGTCGA AGCGGCGCGG CGTATCATCG CCGACCTAGA AGAAACCGAA
CGCCGGGCAT CTGGGGAATA TCAAACGCCC CGCGGAGAGT TGTCGATCAC AATGCCGATC
GAATTCGGCG TGCGGCACGT CATCCCGATC GCGCTCGCCT TCATCGACGA ATATCCCGAA
GTCACACTGA ATCTCATTAC CTCCGACCGG CTCGTCCACA TGGTCGACGA GCATGTCGAC
GTCGCGATCC GCCTCGGCCA TTTGCCCGAC AGCGCGCTCT TTGCGGTCAA GGCTGGCGAG
TTTCGCCTGA TCGCCTGTGC CAGCCCTGCC TATCTGGACC GGCGCGGAGC GCCGACCAGC
CCGCGCGAAC TTTCCGGGCA TGACGGGATC ATGTTCGGAC CGCTGCCGAT GTTCTGGGGC
TACCGCATCG ATGGCGAGGA TGTGATGTGC ACGCCGCGTC CGCGGGTCTC AGTCAACAGC
GCGGCAGGAA ATCTTGCGGC GGTGCTGAGC GGCGTGGGCG TCGCGCGGCT CTTCGACTAT
CAGGTGTCGG AGCATCTTCA GTCGGGCGCG CTCGTGCGCA TTCTTCCTGA TGCCGATGGC
GAGCCGCGCC CCGTTCATAT CGTTTACCCG CGCCAAGGTC TCCTGCCGCT CAAGGTCCGC
GCCTTCATCG ACTGGGCCTC GCCGCGCCTG CGCGCATCGT GCACCGGACT GGACTGCGGC
TGA
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| Protein sequence | MDRLDAMRVL LAVVDAGSLS AGSRALGSPL PSVSRKVAEL ERYLGTNLLV RTSRNIQLTD
AGRDYVEAAR RIIADLEETE RRASGEYQTP RGELSITMPI EFGVRHVIPI ALAFIDEYPE
VTLNLITSDR LVHMVDEHVD VAIRLGHLPD SALFAVKAGE FRLIACASPA YLDRRGAPTS
PRELSGHDGI MFGPLPMFWG YRIDGEDVMC TPRPRVSVNS AAGNLAAVLS GVGVARLFDY
QVSEHLQSGA LVRILPDADG EPRPVHIVYP RQGLLPLKVR AFIDWASPRL RASCTGLDCG
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