| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0070 |
|---|
| Symbol | |
|---|
| ID | 4082143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 76846 |
|---|
| End bp | 77403 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638008431 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615129 |
|---|
| Protein GI | 103485568 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCCC GGCCAATCTT GGTTTCAATA TGTCTGATCA GCATGCCAGC ACAGGCGGCA
GAAAAAACGA CCTATGGGTG GTGCGAACGG CGCGAACCGA CGGACATATA TCGCATGTCA
GGGCTCATGC AGAAATCGCC GAGCACGTCC ACGGTCGACA TCGAGAACGC TTTTCGCGCT
TCTCTTGGAA CCGAAGAGAG CGTCACCTGC TGGTTCTATT ATTCCAGCCC CAGCGAAGGC
GAAGACTATT TCAACCGGCG GCAGTACGTG ATCGCGACCG AGGAGAAGCG CCAGTTCACA
CTAACAGGAT GGACCGGTCC CTATGCGATC ACCGGCAAGC CGGCGCCTAA ACCCGCCGGA
GCCGTTCTGA CGGTAGAAGC GGCCCCTGTC GCACAGCCTG ATGCAGAAGC GGCAGCGCGG
GCCGCAATAA TCGTGCAGCG CCGCGAAGTG GATGCTCGCG TCGGTGCGGC AGCCCGTGCC
GCGCAAGCAG ATGCTGAATA TCAAGCAAAG CTCAGCAAGT TTTTCGAGGA ACTGCGCCGC
CGAGGACGCG CCCAATGA
|
|---|
| Protein sequence | MRARPILVSI CLISMPAQAA EKTTYGWCER REPTDIYRMS GLMQKSPSTS TVDIENAFRA
SLGTEESVTC WFYYSSPSEG EDYFNRRQYV IATEEKRQFT LTGWTGPYAI TGKPAPKPAG
AVLTVEAAPV AQPDAEAAAR AAIIVQRREV DARVGAAARA AQADAEYQAK LSKFFEELRR
RGRAQ
|
|---|
| |