Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0045 |
Symbol | |
ID | 4081538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 46087 |
End bp | 46947 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008405 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_615104 |
Protein GI | 103485543 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.318936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCAACAA TAAATGAAGA CCAGGGGATC ATGACGAAGA GATTGAAGGA TTTTCAGGGC CGGATGCTGC TGGTCGGGTG CGGCAACATG GCCGGCGCGA TGCTCGATCG CTGGCTGGCA TCGGGGCTGG GCGCGGACCG CGTTGCGATC GTCGATCCGC TTGCCGCGCC GCGCGAGGGC GTCGTTCAGT TCGCGTCGCT TGCCGAATGG TGCGCCGCGG GCGGCGGCGC CGACTGGATC ATGCTGGGCA TGAAGCCGCA GCAGCTTGGC GAGGTGGCGG GCGACCTTGC CGACGTCGTC ACCGGCGACA CGCACCTCCT CTCGATCCTC GCGGGCGTTT CGCTCGCCGA CCTTGCCGCG CGCTTTCCGG CTGCAAAGGC GCAGGTGCGT ATCCTGCCCA ATCTCGCCGC GCGCATCGGC GCGGGCGTGT CGGCGGTGGC GAGCAGCGGC GAGGCCGACA TGGCGGCGGT CACCGCATTG CTCGACCCGC TCGGCACCAT TGTCGCGCTG GCTGACGATT CGACGATGGA CCTCGTCACG GCCTTTACCG GAAGCGGTCC CGCGTTCGTG TTTCGCCTGA TCGAATCCTA TGCGGCGGCG GGCGAGCGGC TGGGGCTGTC GGCGGAGGAC GCGCTCAAAC TTGCCACCGC GACCTTCGGC GGCGCCACCG CGCTGCTCGC CGACAGCGGC GAAAAGCCCG GCACGCTCAT CGCACAGGTG GCGAGCAAGG GCGGCACCAC ACAGGCGGGG CTCGACGTGC TCGACAGCGA CGGCCAGCTC GCCGCGCTGC TCACCAATGT CCTGCGCGCG GCGCGCGATC GCGGGCGCGA GCTTGCCGAG ATCGCACGCG GCGAGGGCTG A
|
Protein sequence | MPTINEDQGI MTKRLKDFQG RMLLVGCGNM AGAMLDRWLA SGLGADRVAI VDPLAAPREG VVQFASLAEW CAAGGGADWI MLGMKPQQLG EVAGDLADVV TGDTHLLSIL AGVSLADLAA RFPAAKAQVR ILPNLAARIG AGVSAVASSG EADMAAVTAL LDPLGTIVAL ADDSTMDLVT AFTGSGPAFV FRLIESYAAA GERLGLSAED ALKLATATFG GATALLADSG EKPGTLIAQV ASKGGTTQAG LDVLDSDGQL AALLTNVLRA ARDRGRELAE IARGEG
|
| |