Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0044 |
Symbol | |
ID | 4081537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 44414 |
End bp | 46099 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638008404 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_615103 |
Protein GI | 103485542 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.360147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACGC CGCCCGTGAA GCTCAAATAT CCGATCGCCG CCCTTGTGGG TGCGCTTTGC CTTGCCGGTG CCGGAACCAC GGTCGCGCAG GAGGCGGCGC CCGCCGCGCG CCGCGCGACC GCCGCGATCC AGGCCCCCAA ACTGCTCGTC GTGATCGCGG TCGACCAGCT GTCGGCCGAT CTCTTCGCCG AATATCGTGG CCGCTTCCGC GGCGGTCTTG CGCGGCTCGC AACGGGGGTC GTCTTTCCCT CGGCCTATCA GGCGCACGGC GCGACCGAGA CTTGCCCCGG CCATTCGACG ATCCTGACCG GCAGCCACCC CGCGCGCACC GGCGTCGTCG CGAACAATTA TTTCGACCTG TCGGTCGCGC GCGCCGACAA GCGCGTCTAT TGCGCCGAGG ACGAAACGGT GCCGGACACC AGTTCGGGCA GCGGCAAATA TGCGCCGTCG GTCAAGCATC TGCTCGTCCC GACGCTCGGC GATCTGATGA AGGCGCGCGA TCCGCAGGCG CAGGTCGTGT CGGTCGCGGG CAAGGACCGC GCCGCGATCA TGATGGGCGG GCACCGCGCC GACGAGACGC TGTGGCTCGC GCCCACCGGC CTCACCAGCT ATCGCGGTAA GGCGCTGTCG CCGACTGCCG AGCGCGCGGC TACGGTGATC GCCGCGGCGA TCAACCAGCC GCGCGGGCCG CTGACGCTGC CCGCCGAATG TGCGGCGCAG GATATTGCGA TCCCGCTCGC GAACGGCGCG TCGGTCGGCA CCGGGCGAAT GGCGCGCGAT GCGGGCGATT TCCGCCGCTT CCTGGCCTCA CCCGAAGCCG ATGGCGCGGT GCTTGCGACC GCCGCCGCGC TGCGTCAGGC GCGCCGGATG GGCCAAGGCA GCGGCACCGA CCTGCTGATC ATCGGCCTGT CGGCGACCGA TTATGTCGGG CACGGCACGG GGACCGAGGG CAGCGAAATG TGCCTGCAAC TCGCTGGCCT CGACCGCGAG CTTGGCGATT TTCTTGCGCG GCTCGATGCG ACCGGGATGA ACTATGCCGT CGTGCTGACC GCCGATCATG GCGGGCACGA CCTCCCCGAA CGCAACCGCC AGAATGCGTG GCCCGACGCG CAGCGCATCG ACACGGCGCT GGACCCCGAG GCGCTGGGCA ATGAGGTAGC CGAAAAGCTG GGCCTGCCGC AGCCTTTGCT CCATGGCGAG GGCGGCGACT ATTATCTCTC GAAGGCCCTG ACCGCTGCGC AGCGCAAAGC CGCGCTTGCC GAGATATTGC CGCGCCTGCG CGCGCATCCG CAGGTCGAAA TGGTCGCGAC CCGCGACGAA CTGGCGGCGC ATCCCATCTC CAGACGCGCG CCCGATATGT GGAGCGTGAT GGACCGGCTG CGCGCTTCCT TTCACCCCGA CCGGTCGGGC GATTTCATCG TCGCGCTCAA GCCCCGCGTC ACCCCGATCG CCGAACCGGG CGTGGGCTAT GTCGCGACGC ACGGATCGGT GTGGGATTAT GACCGCCGCG TGCCGATGAT CTTCTGGCGC AAGGACCTTG CCGGGTTCGA GCAGCCCAAT GCCGTGATGA CGGTCGACAT CATGCCGACG CTCGCGGCAC TGATCGGCCT GCCGGTCGAT GCGGGCGCCA TCGATGGCCG CTGCCTCGAC CTGGTTTCGG GTCCGGACAG CAGTTGCCAA CAATAA
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Protein sequence | METPPVKLKY PIAALVGALC LAGAGTTVAQ EAAPAARRAT AAIQAPKLLV VIAVDQLSAD LFAEYRGRFR GGLARLATGV VFPSAYQAHG ATETCPGHST ILTGSHPART GVVANNYFDL SVARADKRVY CAEDETVPDT SSGSGKYAPS VKHLLVPTLG DLMKARDPQA QVVSVAGKDR AAIMMGGHRA DETLWLAPTG LTSYRGKALS PTAERAATVI AAAINQPRGP LTLPAECAAQ DIAIPLANGA SVGTGRMARD AGDFRRFLAS PEADGAVLAT AAALRQARRM GQGSGTDLLI IGLSATDYVG HGTGTEGSEM CLQLAGLDRE LGDFLARLDA TGMNYAVVLT ADHGGHDLPE RNRQNAWPDA QRIDTALDPE ALGNEVAEKL GLPQPLLHGE GGDYYLSKAL TAAQRKAALA EILPRLRAHP QVEMVATRDE LAAHPISRRA PDMWSVMDRL RASFHPDRSG DFIVALKPRV TPIAEPGVGY VATHGSVWDY DRRVPMIFWR KDLAGFEQPN AVMTVDIMPT LAALIGLPVD AGAIDGRCLD LVSGPDSSCQ Q
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