Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0042 |
Symbol | |
ID | 4081535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 41406 |
End bp | 42146 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008402 |
Product | hemolysin A |
Protein accession | YP_615101 |
Protein GI | 103485540 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0545179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.765072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGG TCCGCGCCGA CCAGCTGCTC GTTGACCGCG GCCTGGCCGA AAGCCGGACG CGCGCGCAGG CGCTGATCCT CGCGGGACTG GCCTTCGTCG GCGACCGCAA GATCGACAAG GCGGGGCAGC AGATCGCCGC CGATGCCGCG CTGAGCGTGA AGGGCCGCGA CCATCCGTGG GTGTCGCGCG GCGGGATCAA GCTCGACCAT GCCCTCTCCC ATCTGGGCTG GGACGTCACC GGCGCGGTCG CGATCGACGT CGGATCATCG ACCGGCGGTT TCACCGACGT GCTGCTGAGC CGCGGCGCGG CGCGCGTTTA TGCGGTCGAT TCGGGCACCA ACCAGCTCGC GTGGAAATTG CGGCAGGACG ATCGCGTCAT CGTCCACGAA CAGACGAGCG CGCGCATCCT GACCGCGAAG CATATTCCGG AACCCGTCAG CCTTGTCGTC TGCGACGCCA GCTTCATCGC GCTGTCGAAG GTGCTGCCGG TGCCGATGTC TTTCACCGGG CCCGGAGCGC GTCTCGTCGC GCTGATCAAG CCGCAGTTCG AGGCCGAACG CCATGAGGTC GGCAAGAAAG GCGTCGTGCG CGACGTTGCC GTTCATGCGC GTGTTTGCGC CGACGTGCGC GCTTGGCTTA CCGGCAAAGG CTGGGACGTG GTCGATCTGG TCGAAAGCCC GATCACCGGC CCCGAAGGCA ATGTCGAGTT CCTGATCGCG GCGATCAAGC GAGCGGGTTG A
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Protein sequence | MAKVRADQLL VDRGLAESRT RAQALILAGL AFVGDRKIDK AGQQIAADAA LSVKGRDHPW VSRGGIKLDH ALSHLGWDVT GAVAIDVGSS TGGFTDVLLS RGAARVYAVD SGTNQLAWKL RQDDRVIVHE QTSARILTAK HIPEPVSLVV CDASFIALSK VLPVPMSFTG PGARLVALIK PQFEAERHEV GKKGVVRDVA VHARVCADVR AWLTGKGWDV VDLVESPITG PEGNVEFLIA AIKRAG
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