Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0038 |
Symbol | |
ID | 4082225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 38833 |
End bp | 39786 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008398 |
Product | hypothetical protein |
Protein accession | YP_615097 |
Protein GI | 103485536 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.200907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.793531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGAT CGCTCCTTCG TCGGCCGCTG CTGCCGCTGC TCGCTCTTCC ATTGCTGCTC GCACCGGCGC CGTTGCCTGC GCAAAGTGGC GGCGCGCCCT ATCACGTCGA TGGTCGTGGT TTTACGCGCC TTCAGGACGC CGTCGATGCG ATCGGCGAGG GCGAGGGGAC GATCCGCATC GCGGCCGGCT ATCATCGCGA CTGCGCCGTA CAGACCGCGG GCCGCATCGC CTTTGTCGCG TCCGAACCCG GACGCGCGAT CTTCGATGGC GTGACGTGCG AGGGCAAGGC GGCGCTGGTG CTGCGGGGGC AGGGCGCGCG CGTCGACGGC CTTGTGTTCC AGAATATGCG CGTCCCCGAC GGCAATGGTG CGGGCATCCG GCTGGAGACG AGCGACCTTG ACGTCGTGAA CGCGATGTTC CGCAACAGCG AACAGGGCAT TTTGACCGCC GACGATCCCG AGGCGGCGTT GACCATCGAC CGCTCGACCT TTTCGCGGCT CGGCCGCTGC GATCGCGGCC TCAGCTGCGC GCACAGCGTC TACACCGGCC TCTATGGCCG CGTGACCGTC ACCCGCGCCC GCTTTGAAAA GGGCAGCGGC GGCCATTATC TGAAAACGCG CGCGGCCCGC GTCGATGTGA GCGACAACAG CTTCGACGAC ACGCAGGGCA CCGGCACCAA TTATATGATC GACCTGCCAT CCGGTTCGAC CGGGCGGATT ATAGGCAATC TGTTCGTGCA GGGGCGCGAC AAGGAAAATT ATTCGGCCTT CATCGCGGTC GCGGCCGAAG AGCGCAAGAA TCCGTCGCGC GGCCTCGTCA TCGAAGGCAA TCGCGCCAGC CTGCCCGCGG GGATGGGCCG CCGATCGGTG TTTGTCGCCG ACTGGAGCGG CGAGGCGCTG GCGATCGGCG CGAACGAGCT GGGCGCGGGG CTGGCGCGTT TCGAAAAGCG GTAG
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Protein sequence | MIRSLLRRPL LPLLALPLLL APAPLPAQSG GAPYHVDGRG FTRLQDAVDA IGEGEGTIRI AAGYHRDCAV QTAGRIAFVA SEPGRAIFDG VTCEGKAALV LRGQGARVDG LVFQNMRVPD GNGAGIRLET SDLDVVNAMF RNSEQGILTA DDPEAALTID RSTFSRLGRC DRGLSCAHSV YTGLYGRVTV TRARFEKGSG GHYLKTRAAR VDVSDNSFDD TQGTGTNYMI DLPSGSTGRI IGNLFVQGRD KENYSAFIAV AAEERKNPSR GLVIEGNRAS LPAGMGRRSV FVADWSGEAL AIGANELGAG LARFEKR
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