Gene Sala_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0038 
Symbol 
ID4082225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp38833 
End bp39786 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID638008398 
Producthypothetical protein 
Protein accessionYP_615097 
Protein GI103485536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.200907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.793531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAT CGCTCCTTCG TCGGCCGCTG CTGCCGCTGC TCGCTCTTCC ATTGCTGCTC 
GCACCGGCGC CGTTGCCTGC GCAAAGTGGC GGCGCGCCCT ATCACGTCGA TGGTCGTGGT
TTTACGCGCC TTCAGGACGC CGTCGATGCG ATCGGCGAGG GCGAGGGGAC GATCCGCATC
GCGGCCGGCT ATCATCGCGA CTGCGCCGTA CAGACCGCGG GCCGCATCGC CTTTGTCGCG
TCCGAACCCG GACGCGCGAT CTTCGATGGC GTGACGTGCG AGGGCAAGGC GGCGCTGGTG
CTGCGGGGGC AGGGCGCGCG CGTCGACGGC CTTGTGTTCC AGAATATGCG CGTCCCCGAC
GGCAATGGTG CGGGCATCCG GCTGGAGACG AGCGACCTTG ACGTCGTGAA CGCGATGTTC
CGCAACAGCG AACAGGGCAT TTTGACCGCC GACGATCCCG AGGCGGCGTT GACCATCGAC
CGCTCGACCT TTTCGCGGCT CGGCCGCTGC GATCGCGGCC TCAGCTGCGC GCACAGCGTC
TACACCGGCC TCTATGGCCG CGTGACCGTC ACCCGCGCCC GCTTTGAAAA GGGCAGCGGC
GGCCATTATC TGAAAACGCG CGCGGCCCGC GTCGATGTGA GCGACAACAG CTTCGACGAC
ACGCAGGGCA CCGGCACCAA TTATATGATC GACCTGCCAT CCGGTTCGAC CGGGCGGATT
ATAGGCAATC TGTTCGTGCA GGGGCGCGAC AAGGAAAATT ATTCGGCCTT CATCGCGGTC
GCGGCCGAAG AGCGCAAGAA TCCGTCGCGC GGCCTCGTCA TCGAAGGCAA TCGCGCCAGC
CTGCCCGCGG GGATGGGCCG CCGATCGGTG TTTGTCGCCG ACTGGAGCGG CGAGGCGCTG
GCGATCGGCG CGAACGAGCT GGGCGCGGGG CTGGCGCGTT TCGAAAAGCG GTAG
 
Protein sequence
MIRSLLRRPL LPLLALPLLL APAPLPAQSG GAPYHVDGRG FTRLQDAVDA IGEGEGTIRI 
AAGYHRDCAV QTAGRIAFVA SEPGRAIFDG VTCEGKAALV LRGQGARVDG LVFQNMRVPD
GNGAGIRLET SDLDVVNAMF RNSEQGILTA DDPEAALTID RSTFSRLGRC DRGLSCAHSV
YTGLYGRVTV TRARFEKGSG GHYLKTRAAR VDVSDNSFDD TQGTGTNYMI DLPSGSTGRI
IGNLFVQGRD KENYSAFIAV AAEERKNPSR GLVIEGNRAS LPAGMGRRSV FVADWSGEAL
AIGANELGAG LARFEKR