| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0027 |
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| Symbol | |
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| ID | 4082214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 22212 |
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| End bp | 24476 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008387 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_615086 |
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| Protein GI | 103485525 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.634145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0299657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATC TTCCTTCCGC CCTTGCCATG AGCGTCGCCC TCGCTGCCGC CGCGGTCGCC
CCCGCCGCCG CACAGGAGGC TTCGGTCGTC GCCGCCGAAG AAGGCAGCGG CCTTGGCGAC
ATCGTCGTCA CGGCGCAGCG CCGCGAGGAA AGCCTGCAGG ATGTGCCGGT GTCGGTCAGC
GTATTGTCGG GCGACACGCT GGGCGCGATC ACCTCGACCG GCGCCGACAT CCGCGCGCTC
GCGGGCCGCG TCCCCAGCCT CAACATCGAA AGCTCCTATG GCCGCTCCTT TCCGCGCTTC
TATATCCGCG GCCTCGGCAA CACCGACTTC GACCTCAACG CCTCGCAACC GGTCAGTCTC
GTTTACGACG AGGTCGTGCT CGAAAACCCG ATCCTGAAAG GCTTTCCGAT CTTCGACCTC
GACCGCGTCG AGGTGCTGCG CGGGCCGCAG GGCACGCTCT TCGGCCGCAA CACCCCCGCG
GGCATCGTCA AGTTCGACAC CGTCAAGCCC GGCAAGACCG GCGGCTATGC GCGCGCCAGC
TATGGCCGTT ACGGCACCAG CCAGGTCGAA GTCGCGGCGG GCGCCGCCGA CGACAATGGC
TTTTCGGTGC GCCTCTCGGG CCTCTATCAG CATCGCGACG ACTGGGTCGA CAATATCGCC
ACCACCGCAA AGGACGATCT CGGCGGCTAT GACGACATCG CCGCGCGGCT CCAGTTGCAA
TATGAAAACG GCCCCTTTAC CGGTCGCGTA ACCGGGCAGG TTCGCGTCTT CGACGGCTCG
GCGATCATCT TCCGCGCCAA TACGCAGCTG CCGGGCAGCA ACCGCCTTGT CGGCCTCGGC
GGCGCGGACA CCGCGTTCGA GCGCGACAAG GTGTGGCAGG ACGGAATCAA TTTCCAGAAG
CTCAACACCT ATAATGCCGC ATTGAACCTC GAATATGATT TCGGCGCGGT GACCGCCTAT
TCGATCACCT CCTACTGGAA CGGCAATTTC AAGAGCCGCG GCGACATCGA CGGCGGCTTC
GGCGCGGTAT TCCTGCCCGT ATCGGGTCCC GGACTGATTC CCTTCGCGGC GCAGAGCCAG
GACAATGTGC CCAGCCTCGA CCAGTTCACG CAGGAAATCC GCATCGCCTC GAACAACAGC
GGCGGGCTCG GTTACCAGTT CGGCGCCTTC TATTTCGACG AAGGGCTCGA CATCACCAGC
TTCGATTTCG GCGGTCCGAC CGACGCAGCC CCTGCGGCGA TCGCGGTGCA GCGGCAGGAC
AGCGAAGCCT ATGGCATCTT CGGTTCGGTC AATTACGCCT TCGAGGGCGG CCTGACGCTT
CAGGCCGGCG CGCGCTACAA CCACGACACG CGCGATTTCG TCGCGGCGCG CCCGGTCGAA
ACGCGCCCGA TCTTCGTCGT CAATCCGAAC ACGCCGGTCC CGCCCCAAAG CGCGAGGGTC
AAGGGCAAGC TGCTGACATG GGACGCCAGC GCGACCTGGG AAGCGTCGGA CGCCGTGACG
TTCTACGCCC GCGTTGCGCG CGGCTATCGC GCGCCGTCGG TGCAGGGCCG CCTGACCTTC
TCGCGCGTGA TTTCGACCGC CGATCAGGAA GAAACGATGT CGTATGAGGC GGGGATCAAG
ACCGCCTTCC TCGACGACCG CGTCCGCTTC AACCTCACCG GCTATTATTT CGATACCAAG
GATCTTCAGC TGACCGCGGT CGGCGGCACG GCGAACGTCG CCAGCCTGCT CAACGTCGAT
GCCAAGGGCC ATGGGATCGA GGCCGAATTG CAGGCGGCGC CTGCGCGCGG GCTGACCTTC
AGCGTGGGCG GCGCGTGGAA CGTCGCCGAG ATCGACGATG CCAACGCTTT TGTCGCGGGC
TGTGGTTCGG CGACGCCGTG CACGGTGCTC GACCCGCAGC GGCCGGGCAG CCCCGGCATC
TTCTCGATCG ACGGCAACCA GCTGCCGCAG TCGCCCAAGT GGACGCTGAA TGCGACCGCG
GGTTATGAAA TCCCCGTCGG CGACGGCGCC ATCTATGCCT TCACCGACTG GTATTACCGG
TCGAAGGTGC AGTTCTTCCT CTATCAGTCG GTCGAGTTCT CGGACGACAA GATGATCGAG
GGCGGGCTGC GCGTCGGCTA CCGCACCGAC CGTTTCGACG TCGCGGCCTT TGTGCGCAAC
ATCACCAACG ATGAATCGCC GACCGGCGGC ATCGATTTCA ACAACCTGAC GAGCTATGTC
AACGAACCCC GCATCTGGGG CGTCGAGGCG GGCGTGAAGT TCTAA
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| Protein sequence | MRHLPSALAM SVALAAAAVA PAAAQEASVV AAEEGSGLGD IVVTAQRREE SLQDVPVSVS
VLSGDTLGAI TSTGADIRAL AGRVPSLNIE SSYGRSFPRF YIRGLGNTDF DLNASQPVSL
VYDEVVLENP ILKGFPIFDL DRVEVLRGPQ GTLFGRNTPA GIVKFDTVKP GKTGGYARAS
YGRYGTSQVE VAAGAADDNG FSVRLSGLYQ HRDDWVDNIA TTAKDDLGGY DDIAARLQLQ
YENGPFTGRV TGQVRVFDGS AIIFRANTQL PGSNRLVGLG GADTAFERDK VWQDGINFQK
LNTYNAALNL EYDFGAVTAY SITSYWNGNF KSRGDIDGGF GAVFLPVSGP GLIPFAAQSQ
DNVPSLDQFT QEIRIASNNS GGLGYQFGAF YFDEGLDITS FDFGGPTDAA PAAIAVQRQD
SEAYGIFGSV NYAFEGGLTL QAGARYNHDT RDFVAARPVE TRPIFVVNPN TPVPPQSARV
KGKLLTWDAS ATWEASDAVT FYARVARGYR APSVQGRLTF SRVISTADQE ETMSYEAGIK
TAFLDDRVRF NLTGYYFDTK DLQLTAVGGT ANVASLLNVD AKGHGIEAEL QAAPARGLTF
SVGGAWNVAE IDDANAFVAG CGSATPCTVL DPQRPGSPGI FSIDGNQLPQ SPKWTLNATA
GYEIPVGDGA IYAFTDWYYR SKVQFFLYQS VEFSDDKMIE GGLRVGYRTD RFDVAAFVRN
ITNDESPTGG IDFNNLTSYV NEPRIWGVEA GVKF
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