Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0016 |
Symbol | |
ID | 4083147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 11849 |
End bp | 12523 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638008376 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_615075 |
Protein GI | 103485514 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0486825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCGA TCAACCCCGA CGCCGCCATC GTGCTCACTG CCTTTGACTG GGTTCCCGAT TTCGCGCGCG GCTTTGTCCG CGACCTGCGC CCGCGCTGGG CATGCGAGGA AATCGGCCTC GATTATGCCG AGCATCTGAT CAGCGCGGTC AACCGCCCCG CCGACCATTT CCTGTTCCAG CCCTGGGGGC AGGTGCCGGT GCTCAACGAC GGCGGCATCC GTTTGTTCGA AAGCGGCGCG ATCCTGCTTC ACCTCGCCGA AAAGGACGAA CGGCTGATGC CGCGCGATGC GCAGGGCCGC GCCAACACAC TCGCCTGGCT GTTCGCCGCC TATAACAGCG TCGAACCGAT GCTGTTCGAA CTGGGCAATG TCGATATTTT CTCGAAGGAC GAGGAATGGG CGAAGCTCCG CCGCCCCGGC CTGATCGACT TCATTCGTGG CCGGCTCGGC CGTCTCAACG ACGCGATGGG CGACAAACCC TATCTGACCG GCGACTTCAC CGTCGCCGAC ATTGCGATGG CGACCGTGCT GCGCGAAGCC GTCGAGGCGG GACTGATCGC CGAACAGCCG CGGCTCCAGG CCTATCTCGA CCGATGCCTG GCACGGCCTG CCTTTCGACG TGCGCTCGAC GCGCAGCTTG CCGCGTTCCG TGAAGAGGCG GGTCCGCCTG CCTGA
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Protein sequence | MMPINPDAAI VLTAFDWVPD FARGFVRDLR PRWACEEIGL DYAEHLISAV NRPADHFLFQ PWGQVPVLND GGIRLFESGA ILLHLAEKDE RLMPRDAQGR ANTLAWLFAA YNSVEPMLFE LGNVDIFSKD EEWAKLRRPG LIDFIRGRLG RLNDAMGDKP YLTGDFTVAD IAMATVLREA VEAGLIAEQP RLQAYLDRCL ARPAFRRALD AQLAAFREEA GPPA
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