Gene Sala_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0012 
Symbol 
ID4083143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp9228 
End bp10031 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID638008372 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_615071 
Protein GI103485510 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.688447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0527448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC CCCCAGGCAG CTTCATCTGG TACGAACTGA TGACGAGCGA CCCCGACGGC 
GCGGCGCGCT TTTACGGCGC GGTTGTCGGC TGGACGATCG CGGCGCACAG CGACCCCGGC
GCGCCCGGCG GCGTCGATTA CCGGATGATC GTCCGCACGA ATGGCGGTAA CGCGGGCGGC
GTGTTGGCGC TCAATGCCGA CATGATCGCG GGCGGCGCGC GGCCGGGCTG GCTCGGCTAT
CTTTACACCC CCGACGTCGA TGCGGCGGTC GCAGCGATCA CCGCCGACGG CGGCACCGTA
CACATGCCGG CGCACGACCT GCCCGTCGGG CGTATCGCGA TGGTCGCCGA TCCGCAGGGC
GCGCCCTTTT ACATCATGAA TCCGATTCCG CCCGAGGGCG AACCCGACAA GGTTGCCGAC
GCTTTTTCGG TGACCGAGGC GCAGCATATA CGCTGGAACG AACTGGCGAC GAGCGAACCC
GACACCGCGA TCACATTCTA TCAGCGGCAT TTCGGCTGGG GACAGGAAGG CGCGATGGAT
ATGGGCGAAC TTGGCCAATA TCGCTTCCTC CAGCACGGCG GCGACATGAT TGGCGCGGTG
ATGCCGCTGA TGGAGGGGAT CCCCGCGCCG ACGTGGACCT TTTACATCGG CGTCGACGAC
ATCGACCGCG CGCGGGGTGC GGTCGCCGCG AACGGCGGGA CGATCACCAA CGAACCGATG
GAAATACCGG GCGGCGAATA TGCGATGAAC GCCATCGACC CGCAGGGCGC GGCGATCGGC
TTTGTTGGGC CGCGCAAAGG CTGA
 
Protein sequence
MTNPPGSFIW YELMTSDPDG AARFYGAVVG WTIAAHSDPG APGGVDYRMI VRTNGGNAGG 
VLALNADMIA GGARPGWLGY LYTPDVDAAV AAITADGGTV HMPAHDLPVG RIAMVADPQG
APFYIMNPIP PEGEPDKVAD AFSVTEAQHI RWNELATSEP DTAITFYQRH FGWGQEGAMD
MGELGQYRFL QHGGDMIGAV MPLMEGIPAP TWTFYIGVDD IDRARGAVAA NGGTITNEPM
EIPGGEYAMN AIDPQGAAIG FVGPRKG