Gene Sala_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0011 
Symbol 
ID4083142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp8689 
End bp9192 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID638008371 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_615070 
Protein GI103485509 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.448662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0489572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA AGCCCCCCCT GACCCTATGC CTCTGGTACG AAGGCGACGC CGAGGAAGCG 
GCCAGTTTCT ATGCCGAAAC CTTTGCCGAC AGCCATGTGG GCGCCGTCCA CCGCGCACCC
GGCGACACGC CGGGCGGCAA GGAAGGCGAT GTGCTGACCG TCGAGTTCAC GCTGCTCGGC
ACGCCGTGCC TCGGCCTCAA CGGCCCACCG ATCTTCAAGC ATAGCGAGGC CTTTTCCTTC
ATCGTCCACA CCGACACGCA GGAGGAAACC GACCGGCTGT GGGACGCGAT TGTCGGCAAT
GGCGGGCAGG AAAGCATGTG CGGCTGGTGC AAGGACAAAT GGGGCGTGAG CTGGCAGATT
ACCCCGCGCG TCCTGATCGA AGCGACGACG AGCAGCGACA AGGCCGCCGC CAAGCGCGCG
TTCGAGGCGA TGATGACGAT GAAAAAGATC GACATCGCGG CGATCGAGGC CGCGGTGCGG
GGCGAAGCCG TTGGCGCGGC GTAG
 
Protein sequence
MMSKPPLTLC LWYEGDAEEA ASFYAETFAD SHVGAVHRAP GDTPGGKEGD VLTVEFTLLG 
TPCLGLNGPP IFKHSEAFSF IVHTDTQEET DRLWDAIVGN GGQESMCGWC KDKWGVSWQI
TPRVLIEATT SSDKAAAKRA FEAMMTMKKI DIAAIEAAVR GEAVGAA