Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0011 |
Symbol | |
ID | 4083142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 8689 |
End bp | 9192 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638008371 |
Product | 3-demethylubiquinone-9 3-methyltransferase |
Protein accession | YP_615070 |
Protein GI | 103485509 |
COG category | [S] Function unknown |
COG ID | [COG3865] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.448662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0489572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAGCA AGCCCCCCCT GACCCTATGC CTCTGGTACG AAGGCGACGC CGAGGAAGCG GCCAGTTTCT ATGCCGAAAC CTTTGCCGAC AGCCATGTGG GCGCCGTCCA CCGCGCACCC GGCGACACGC CGGGCGGCAA GGAAGGCGAT GTGCTGACCG TCGAGTTCAC GCTGCTCGGC ACGCCGTGCC TCGGCCTCAA CGGCCCACCG ATCTTCAAGC ATAGCGAGGC CTTTTCCTTC ATCGTCCACA CCGACACGCA GGAGGAAACC GACCGGCTGT GGGACGCGAT TGTCGGCAAT GGCGGGCAGG AAAGCATGTG CGGCTGGTGC AAGGACAAAT GGGGCGTGAG CTGGCAGATT ACCCCGCGCG TCCTGATCGA AGCGACGACG AGCAGCGACA AGGCCGCCGC CAAGCGCGCG TTCGAGGCGA TGATGACGAT GAAAAAGATC GACATCGCGG CGATCGAGGC CGCGGTGCGG GGCGAAGCCG TTGGCGCGGC GTAG
|
Protein sequence | MMSKPPLTLC LWYEGDAEEA ASFYAETFAD SHVGAVHRAP GDTPGGKEGD VLTVEFTLLG TPCLGLNGPP IFKHSEAFSF IVHTDTQEET DRLWDAIVGN GGQESMCGWC KDKWGVSWQI TPRVLIEATT SSDKAAAKRA FEAMMTMKKI DIAAIEAAVR GEAVGAA
|
| |