| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0003 |
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| Symbol | engB |
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| ID | 4083134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2549 |
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| End bp | 3208 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008363 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_615062 |
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| Protein GI | 103485501 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0524165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGAGA TCGAACTCGA ACCCGGTGCG GATCCCGAAC GGGCGGAGCG CGCGCGCAAG
CTGTTTTCAG GCCCGATCGC CTTCCTGAAA TCGGCGCCCG CGCTTCAGCA TCTGCCTGTG
CCGTCGGTGC CGGAGATTGC CTTTGCGGGT CGATCGAACG TCGGCAAATC GTCGCTGCTC
AACGCGCTGA CCAACCGCAA CGGCCTCGCG CGCACCTCGG TCACGCCGGG ACGCACGCAG
GAACTCAACT ATTTCGACGT GGGCGAACCG CCGGTGTTCC GCCTCGTCGA CATGCCCGGT
TACGGCTTTG CCAAGGCGCC GAAGGATGTC GTCAGGAAAT GGCGCTTCCT GATCAACGAT
TACCTCCGCG GACGGCAGGT GCTGAAACGC ACATTGGTGC TGATCGACAG CCGCCACGGC
ATCAAGGATG TCGACCGCGA TGTGCTCGAA ATGCTCGACA CCGCGGCGGT GAGCTACCGC
CTCGTGCTCA CCAAGGCCGA CAAGATCAAG GCGAGCGCGC TCGCCGACGT CCATGCCGCG
ACCGAGGCCG AGGCGCGCAA ACACCCCGCC GCGCACCCCG AGGTGATTGC GACGAGCAGC
GAGAAAGGCA TGGGGATCGC CGAACTGCGC ACCGCGGTGC TGGAGGCGGT GGAATTATAG
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| Protein sequence | MSEIELEPGA DPERAERARK LFSGPIAFLK SAPALQHLPV PSVPEIAFAG RSNVGKSSLL
NALTNRNGLA RTSVTPGRTQ ELNYFDVGEP PVFRLVDMPG YGFAKAPKDV VRKWRFLIND
YLRGRQVLKR TLVLIDSRHG IKDVDRDVLE MLDTAAVSYR LVLTKADKIK ASALADVHAA
TEAEARKHPA AHPEVIATSS EKGMGIAELR TAVLEAVEL
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