| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3026 |
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| Symbol | |
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| ID | 4076599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3194450 |
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| End bp | 3195625 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008355 |
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| Product | beta-ketothiolase |
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| Protein accession | YP_615020 |
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| Protein GI | 99082866 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.345239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.537231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA TTGTGATTCT GGATGGCGCC CGCACTGCGA TCGGAACCTT TGGTGGCGCG
CTGGCCCAGA CGGCGCCGAT AGATCTTGGA GCGACGGTCG CCAAAGCTGC GATGGAGCGG
TCTGGTGTCG ATCCTGCTCA GATCGGCACT GTTGTCTATG GTCATGTGAT CAACACCGAA
CCACGTGATA TGTATCTGTC GCGGGTGGCA GCGATGCAGG CGGGAATTCC AGAAAGCACG
CCTGCGATGA ATGTGAACCG CCTCTGCGGG TCCGGCGCGC AAGCCATCGT ATCAGGAATC
CAAGCCTTGA TGCTGGGAGA TGCTGAATAC GCTCTGACCG GCGGAGCAGA AAGCATGTCG
CGCAGTCCAT TCATCACGCC TTCGACCCGC TGGGGGCAAA AGATGGGTGA CGTGAAATCG
CTCGACATGA TGCTGGGCGC TCTGAATTGC CCGTTTGGGA CTGGCCACAT GGGAGTGACG
GCAGAGAATG TCGCAGATGA GCATGAGATC ACGCGCGCTC AGATGGATGA GTTCGCGCTG
GTTAGCCAGA CCCGGGCCGC TGCCGCCATC GAGGCCGGCT ACTTCCAAAG CCAGATCGTG
CCGGTTGATG TCAAGGTGAA GCGGGACATG GTTCCGTTCG AAGTCGATGA GCATCCAAAG
GGCACATCGA TGGAGGCGCT CTCCGGGCTG CGTCCGGTGT TCAAGAAGGA TGGGCGTGTG
ACGGCTGGCA ATGCGTCGGG AATCAACGAT GGCGCGGCTG CATTGGTGCT CGCCACAGCC
GAGGCGGCTG AGAAATCCGG TCTGAAACCC AAGGCCCGTA TCCTCGGATA TGCCCATGCA
GGCGTTCGTC CGGAGGTCAT GGGCGTAGGT CCGATTCCGG CTGTAGAGCA GCTTCTGAAG
CGGATTGATA TGACTGTTGG TGACTTTGAC CTCATTGAAT CCAACGAGGC CTTTGCGGCG
CAGGCTCTGG CCGTCAACAA GGCACTTGGG TTGGACAGTG CCAAGGTAAA TCCGAATGGC
GGCGCAATTG CCCTGGGCCA TCCGGTCGGC GCAACCGGCG CCATCATCAC TGTCAAAGCG
CTCTATGAGC TGGAGCGCAC TGGCGGGCGC CGTGCGATCA TCACCATGTG TATCGGGGGC
GGGCAGGGGA TCGCCCTCGC GATCGAACGG ATCTGA
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| Protein sequence | MTDIVILDGA RTAIGTFGGA LAQTAPIDLG ATVAKAAMER SGVDPAQIGT VVYGHVINTE
PRDMYLSRVA AMQAGIPEST PAMNVNRLCG SGAQAIVSGI QALMLGDAEY ALTGGAESMS
RSPFITPSTR WGQKMGDVKS LDMMLGALNC PFGTGHMGVT AENVADEHEI TRAQMDEFAL
VSQTRAAAAI EAGYFQSQIV PVDVKVKRDM VPFEVDEHPK GTSMEALSGL RPVFKKDGRV
TAGNASGIND GAAALVLATA EAAEKSGLKP KARILGYAHA GVRPEVMGVG PIPAVEQLLK
RIDMTVGDFD LIESNEAFAA QALAVNKALG LDSAKVNPNG GAIALGHPVG ATGAIITVKA
LYELERTGGR RAIITMCIGG GQGIALAIER I
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