| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3011 |
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| Symbol | |
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| ID | 4076584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3179412 |
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| End bp | 3180365 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008340 |
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| Product | threonine dehydratase |
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| Protein accession | YP_615005 |
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| Protein GI | 99082851 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.302173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGA CATCCCAAAT TTCCGGCGCG CGCGGGAGAA TTGCCCAGCA TGTGGTGAAA
ACGCCAACCG TCTCGGTTCA GAGCTTTGGC CTCGCATTTC CGGTCGAATT GAAGCTCGAG
CATCTCCAGC ATGCAGGCAG TTTTAAGGCG CGCGGTGCGT TTAACACGCT CCTGTCGACC
CCTGTCCCCG AAGCAGGTCT GGTGGCGGCC TCCGGTGGCA ATCATGGCGC GGCGGTGGCC
TTTGCCGCCC GCGCTTTGGG TCACAACGCC AAGATCTATG TCCCCGAGAT TGCAGGCCAG
ACCAAGATTG ACCTGATCCG CTCAACCGGA GCGGAGCTTG AGGTCGTGCC CGGCGCCTAT
GCCAATGCAC TCGAAGCGGC ACAGGATTGG GAGCTACAAA CGGGTGCCAT GCAGATCCAT
GCCTATGACG CACCCGCAAC GGTCGCTGGA CAGGGCACTT TGTTTGCTGA ATGGGAGGAA
CAGGGGCTCG AGGCTGACAC CATTTTGATC GCAGTGGGCG GCGGTGGTCT CATCGGCGGA
GCGCTGGGCT GGTTTGAGGG CCGGCGCAAG GTGGTCGCAG TAGAACCTGC AACCTCTTGC
GCGCTGAAAA CCGCACTGAT GAATGGCAAA CCTACCAATG TTGACGTTGG CGGCATCGCT
GCCAATGCCT TGGGGGCGCG CCGCATTGGA GACATCTGTT TTGACCTTGC GCATAACGCG
CGCACGCCAA GCGTGATTGT CCCAGATGCT GCCATCGAGG CCGCACAACA CGCGCTCTGG
CGCGATCATC GCCTCCTGGT GGAGCCTGCA GGGGCAACTG CGCTTGCGGC TTTGATGTGC
GGGGCCTATC TGCCTGCGCG TGATGAAAAG GTTTCGGTGC TCTTGTGTGG TGGCAACATT
GACCCAGAAC CGCTGACGGA TCCCGCCACA CGACTTGATG TCTCGTTCAA CTAA
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| Protein sequence | MDWTSQISGA RGRIAQHVVK TPTVSVQSFG LAFPVELKLE HLQHAGSFKA RGAFNTLLST
PVPEAGLVAA SGGNHGAAVA FAARALGHNA KIYVPEIAGQ TKIDLIRSTG AELEVVPGAY
ANALEAAQDW ELQTGAMQIH AYDAPATVAG QGTLFAEWEE QGLEADTILI AVGGGGLIGG
ALGWFEGRRK VVAVEPATSC ALKTALMNGK PTNVDVGGIA ANALGARRIG DICFDLAHNA
RTPSVIVPDA AIEAAQHALW RDHRLLVEPA GATALAALMC GAYLPARDEK VSVLLCGGNI
DPEPLTDPAT RLDVSFN
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