| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2991 |
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| Symbol | |
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| ID | 4078021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3157346 |
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| End bp | 3158713 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008320 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_614985 |
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| Protein GI | 99082831 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.729746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.516476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGTT GGATAAAGAC CGCGCTGTGG CTTGGGGTGG TCTTGCCCGC AGGTGCAGCG
CTCGCAGCGA GTGAAACAGA GGCTATAAAG GACCGGCTGC GCCCAGAAGA GCGCCCGCAG
CAGGCATACG ACACCGCCGG ATCGCTCGCG CTGGCGTCCC TTACCACAAT CCGGCCCATG
GCTCGCAAAA GCGTCGCGCC AGCCGCGCAA GACGCACTGG CCCCTGCACG CGAGGTAGAC
GGTGATGCCA ATGCCGGGTT TCAACGCTGG ATCACGGCAT TCAAGATCCG CGCCCAAACG
CAGGGAATCG GAGCGGCGAC GCTTCGCGCG GCATTCAACG GCGTCACATA TGATGCCTCC
GTCATCAAAC GTGATCGTAA TCAATCCGAA TTCACCAAAA CGATCTGGGA CTACCTCGAC
AGTGCGGCGT CCGAGAGCCG TGTTCGGAAC GGAACCAAGG CTCTGGATGC GCATCGCAAC
ACATTGGAAC GCATCGAAAA ACATTTTGGT GTCGACAAGG AAATCGTGGT TGCTGTCTGG
GGGCTCGAGA GCAGCTACGG TAGCTTTCGG GGCGATATGG ATATCATTCG CTCGCTGGCG
ACGCTTGCCT ATGACGGCAG ACGCGGCGAC TTTTTCGAGG AGCAGCTAAT CGCCGCACTC
AAGATCATCG AGGCAGGCGA TGTGAATCCC CGCACGATGA CCGGCAGTTG GGCAGGCGCG
ATGGGGCACA CACAATTCAT CCCCACCAGT TATCTGGATT ACGCGGTGGA CTTTACCGGT
GATGGAAAAC GCGACATTTG GTCGGACACG CCCACGGACG CGCTGGCCTC TACCGCAGCC
TATCTCAAAG CATTCGGATG GGTCACTGGC CAGCCCTGGG GCATCGAAGT TGTCTTGCCG
CGTGGCTTTG ATTTCACACT GGCCAACCGC AAGATCCAAA AGAGCCCTCG GGAATGGGCA
GACCTTGGCG TGCGCGCGAC TGACGGCCGC CCGATTAAGG ATCATGGCGT CGCGTCGATC
CTCTTGCCCG CCGGAGGCAC TGGCGCTGCC TTCATGATTT TCAAGAACTT CTCGGTGCTT
GAACGGTACA ACACTGCGGA TGCCTATGTC ATCGGGGTGG GTCATCTCAG CGATCGGCTG
AAGGGAGGCG AAAAGATCAA AGGGAGTTGG CCGCGCGGTG ATCGAGCGCT GACCTTCACG
GAACGCAAGG AGCTGCAAGA ACGTCTGACC CGCGCCGGGT TCAGCACCGA AGGAATAGAT
GGTCGAATTG GTCCCAAGAC CATCGCTGCC GTGCGCGCCT ATCAAAGCGC AAAGGGCCTC
ATGCCAGATG GGTATGCATC GTTGTCTCTT CTGGAGAAGC TCCGCTAA
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| Protein sequence | MRSWIKTALW LGVVLPAGAA LAASETEAIK DRLRPEERPQ QAYDTAGSLA LASLTTIRPM
ARKSVAPAAQ DALAPAREVD GDANAGFQRW ITAFKIRAQT QGIGAATLRA AFNGVTYDAS
VIKRDRNQSE FTKTIWDYLD SAASESRVRN GTKALDAHRN TLERIEKHFG VDKEIVVAVW
GLESSYGSFR GDMDIIRSLA TLAYDGRRGD FFEEQLIAAL KIIEAGDVNP RTMTGSWAGA
MGHTQFIPTS YLDYAVDFTG DGKRDIWSDT PTDALASTAA YLKAFGWVTG QPWGIEVVLP
RGFDFTLANR KIQKSPREWA DLGVRATDGR PIKDHGVASI LLPAGGTGAA FMIFKNFSVL
ERYNTADAYV IGVGHLSDRL KGGEKIKGSW PRGDRALTFT ERKELQERLT RAGFSTEGID
GRIGPKTIAA VRAYQSAKGL MPDGYASLSL LEKLR
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