| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2916 |
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| Symbol | |
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| ID | 4078594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3084178 |
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| End bp | 3085029 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008245 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_614910 |
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| Protein GI | 99082756 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.438162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.714962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAG GTCTCACTTT TTTGCAAGGC GTCGTGTTTG CGACTGCTTT CGGCCTCGCA
GCACCTGCAT TTGCCGAACT CAACGCCAAT ACGGTGGTTG CGACGGTCAA TGGAGAAGAC
ATCACCGTCG GCAATATGAT CGTTGCGCGC GCAAAACTGC CTGCTCAATA TCAAAGCCTG
CCGGATGATC TGCTGTTCAA AGCCCTCCTC GACCAGCTGA TTCAGCAAAC TGTGCTGAAA
CAGCAGCTGC ACGGGGACAT TCCGGAATAT GTGCGTCTCT CTGTCGAACA CGAGCAGCGC
TCGCTCTTGG CGTCTGATGT GATCGAAGCG GTCATGGAAG GAGCCCAGAC CGAGGATGCA
ATTCGCGATG CCTATGATGC GCGTTACAGC AGCGACGACG GCGGCGATGA GTTCAACGCC
TCCCACATTC TGCTAGAAAG CGAAGAAGCC GCGTTGGAAA TCAAGAGCCA GCTTGATGAG
GGCGCGGATT TCGCTGCATT GGCCAAGGAA TCCTCGACCG GCCCCAGTGG CCCGAATGGT
GGCGCGCTTG GTTGGTTTGA AAACGGTCGC ATGGTTCCGG AGTTCGAGGC CGCCATCTCC
GACATGCGCT CTGGCGAAGT ATCCGGCCCG GTGCAGACCC AGTTTGGCTG GCACATCATC
AAGCTGAATG ATCGCCGCAA ACTTGAAGCC CCCGAATACG AAGACGTGCG GGATGAAATC
GCTCAGGAAC TCGCTCAGCA AGCGGTCGAA GATCGAATCA GCCAGCTGAC CGCGACGGCG
ACAATCAATC GGCCAGAGAT TGAAAACCTC GAGCCCTCCG TCCTGCGTGA CATGAGCCTG
ATCGAGAACT GA
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| Protein sequence | MRKGLTFLQG VVFATAFGLA APAFAELNAN TVVATVNGED ITVGNMIVAR AKLPAQYQSL
PDDLLFKALL DQLIQQTVLK QQLHGDIPEY VRLSVEHEQR SLLASDVIEA VMEGAQTEDA
IRDAYDARYS SDDGGDEFNA SHILLESEEA ALEIKSQLDE GADFAALAKE SSTGPSGPNG
GALGWFENGR MVPEFEAAIS DMRSGEVSGP VQTQFGWHII KLNDRRKLEA PEYEDVRDEI
AQELAQQAVE DRISQLTATA TINRPEIENL EPSVLRDMSL IEN
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