Gene TM1040_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2909 
Symbol 
ID4078587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3076592 
End bp3077203 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID638008238 
Producthypothetical protein 
Protein accessionYP_614903 
Protein GI99082749 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.829531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG ACCTGATTGC CAAAGCTGCG ATTGACCGTC GCCTGGCCGA GATCATCACC 
CCGGTGATCG AGGATCTGGG TTACGAGCTG GTCCGTATCC GGCTGATGTC TGGCAAAACC
ACGACGCTGC AGATCATGGC AGATCGCCCC GATGGGGGGA TCGAGGTTGA TGATTGTGCC
GCGATCTCAA ACGCTGTGAG CGCCACACTC GACGTCGAAG ATCCGATCCT TGACGCCTAC
ACGCTTGAGG TGTCGAGCCC CGGAATTGAC CGGCCGCTGA CGCGTCTCAA GGACTTCGAC
ATGTTCGAAG GCTACGAGGC CAAGCTGGAG ACCGCAGATC TCATCGACGG CCGTCGCCGC
TTTAAGGGCG AGCTGGCAGG CATCGAGGAC GACGAAGTAC TCATCAATAT TGAGGAACAC
GGCGAGACCG TGACCATCGG TCTCAAATTC GACTGGCTGA GCGATGCAAA GCTGGTGCTG
ACCGATGACC TGATCAAGGA AATGCTGCGC CAGCGGAAGG CCGCTGGTGT TCTGAACGAA
GACGCCTTTG ACGACATCGA GACCGAAGGG TCCGCAGAAG GGACCACAGG GTCCGAAGAG
GAGAACAAGT AA
 
Protein sequence
MTNDLIAKAA IDRRLAEIIT PVIEDLGYEL VRIRLMSGKT TTLQIMADRP DGGIEVDDCA 
AISNAVSATL DVEDPILDAY TLEVSSPGID RPLTRLKDFD MFEGYEAKLE TADLIDGRRR
FKGELAGIED DEVLINIEEH GETVTIGLKF DWLSDAKLVL TDDLIKEMLR QRKAAGVLNE
DAFDDIETEG SAEGTTGSEE ENK