| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2890 |
|---|
| Symbol | |
|---|
| ID | 4078568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 3058901 |
|---|
| End bp | 3059500 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638008219 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_614884 |
|---|
| Protein GI | 99082730 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCGC TTGCGGAGAC CATCGCCAAG GCGCTGACAC GCGCTCGCAC GGAAACGTCG
GATTTCGATC TAAACCCGGA AACCGTGCTG CCTGCGGGGC GGAAGTTGCG CCCCGCGGGT
GTGCTCGTCG GAATTGAGAC CTACGGCGCA GTGCCACAGG TCGTCCTGAC AAAGCGCTCC
TCCGTGCTCA AACACCACCC CGGCCAGATT GCCTTTCCCG GTGGCAAAGT GGACCCAACG
GACAATGACG CGACTGCTGC CGCCCTAAGG GAAGCGTGGG AAGAAATCGC GTTGCCGCGA
GAGCTGCCTC GAATCCTCGG TCATTTGCCC TGCCACGAAA CCGTGACAGG GTTTCAAGTG
ACCCCCGTGG TTGCGGTCAT AGATCAGCCG TTCGAGGCTC GTGCCGAGGC GGGCGAAGTG
GCAGAGGTCT TTCGGGTGCC GCTTTCTCAT GTTCTTGATA TTGAACGATA TCAGATACAA
TCTCGACGCT GGCGCGGCAC AAAACGGTTC TACTTTGCGG TGCCATTTGG CCCCTATTAC
ATCTGGGGGG CAACCGCGCG TATGTTGCGC GGATTTGCTG CGATCATGGA CACTCGATGA
|
|---|
| Protein sequence | MSALAETIAK ALTRARTETS DFDLNPETVL PAGRKLRPAG VLVGIETYGA VPQVVLTKRS
SVLKHHPGQI AFPGGKVDPT DNDATAAALR EAWEEIALPR ELPRILGHLP CHETVTGFQV
TPVVAVIDQP FEARAEAGEV AEVFRVPLSH VLDIERYQIQ SRRWRGTKRF YFAVPFGPYY
IWGATARMLR GFAAIMDTR
|
|---|
| |