| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2878 |
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| Symbol | |
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| ID | 4076412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3049119 |
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| End bp | 3049991 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008207 |
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| Product | PfkB |
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| Protein accession | YP_614872 |
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| Protein GI | 99082718 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.662908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT GGAACCTTGG GTCGATCAAC ATCGACATGG TCTATTCGCT GCCGCATATG
CCGCAGCCGG GCGAGACGCT GGCAGCCACT TCCTTTGATC AGGGTCTGGG CGGCAAGGGC
GCAAATATGT CGGTTGCCGC CGCCCGCGCT GGGGCGCATG CCTGCCATAT CGGGGCCATT
GGTCCAGAGG GGAAATGGTG TGTGGATCGG TTGATGGAGT ACGGTGTCGA TACGCGCCAT
ATCGTGCAAA GCGATACCGC GACCGGTCAT GCCATCATCG CTGTGGATCC GGCCGGTGAA
AATCAGATCA TCCTCTATCC CGGTGCTAAC CGTGGGCTTG GTGCCGATCA GATCGGCCAA
GCACTCAGCG CGGCAAACGC AGGGGATATT CTGCTGATGC AGAATGAGAC CAACATGCAG
GCCGAGGCCG CAGAGATGGG GCGCAAACTG GGGCTGCGCG TCGCATATGC GGCGGCGCCT
TTTGATGCGG CAGCGGTTCA GGCGGTTTTG CCCTTTGTGG ATCTCTTGTT TCTCAACGAG
GTCGAGGCGG CACAGCTTCA GGACGCCACA GGAAAACCAC CTCAGGATCT GGGTGTCGAC
GATGTGATCG TGACACTCGG GGCTGAAGGC GCGCGCCATT TTGACGGTCG CACCGGCGCT
GTGAGCGATG TGGCTGCGCA GAAGGTGACT GCAGTGGATA CCACCGGGGC GGGGGACACA
TTCACCGGAT ATGTTCTGGC TGCGCTGGAT CGCGGATTAC CGATGGCGCA GGCCATGGCG
CAGGCCTCGC GGGCCGGAGC CTTGATGGTT ACACGTCACG GAGCGGCAGA TGTTATCCCG
GACCTCAAAG AGGTTCAGGA CGCCAAATTC TGA
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| Protein sequence | MAIWNLGSIN IDMVYSLPHM PQPGETLAAT SFDQGLGGKG ANMSVAAARA GAHACHIGAI
GPEGKWCVDR LMEYGVDTRH IVQSDTATGH AIIAVDPAGE NQIILYPGAN RGLGADQIGQ
ALSAANAGDI LLMQNETNMQ AEAAEMGRKL GLRVAYAAAP FDAAAVQAVL PFVDLLFLNE
VEAAQLQDAT GKPPQDLGVD DVIVTLGAEG ARHFDGRTGA VSDVAAQKVT AVDTTGAGDT
FTGYVLAALD RGLPMAQAMA QASRAGALMV TRHGAADVIP DLKEVQDAKF
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