| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2875 |
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| Symbol | |
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| ID | 4076409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3042910 |
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| End bp | 3045549 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008204 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_614869 |
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| Protein GI | 99082715 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.928835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTCA CGCCGATGAT GGCGCAATAT CTCGAGATCA AGGCGCAATA CCCGGATGCG
CTCCTGTTTT ATCGCATGGG CGATTTCTAC GAGATGTTCT TTGAGGATGC GGTCAACGCG
GCCGAGGCGC TTGATATCGC GCTCACAAAA CGGGGCAAAC ACGAAGGCGA GGATATTCCC
ATGTGCGGCG TTCCCGTGCA TGCCGCCGAA GGGTATCTTT TGACCCTGAT CCGCAAAGGG
TTTCGCGTTG CCGTGGGCGA GCAGCTTGAA AGCCCCGCAG AAGCCAAGAA ACGTGGTTCC
AAATCCGTTG TGAAACGTGA CGTGGTACGC CTGGTGACGC CCGGCACGCT TACCGAGGAT
TCCCTGCTCG AAGCGCGTCG CCATAACTTC CTGGTGGCCT ATTCCGAACT GCGTGACCAG
GCCGCCCTGG CTTGGGCCGA TATATCAACC GGCGCGTTTC ACGTCATGCC CGTCGCCCGC
GTGCGTCTCA GTCCAGAGCT TGCTCGTCTT GCCCCATCAG AGCTGATCGT TGCAGATGGC
CCCATCTTTG ACGCCACATT GCCTTTGGCA GAGGAGTACA AAATCCCGCT CACGCCTCTT
GGGAAGGCAA GCTTTGACAG TACCGCTGCA GAAAAACGTC TCTGCCATCT GTTCAATGTG
AGCGCGCTCG ATGGTTTTGG CACCTTCAAC AGGGCCGAAA TCTCGGCCAT GGGCGCTGTC
GTGGACTATC TGGAGATCAC GCAGAAAGGC AAACTGCCCC TGTTGCAGCC TCCACTCCAG
GAATCCGAGG ATCGGACAGT CCAGATCGAC GCCTCAACCC GGCGTAACCT CGAACTCACC
CGCTCGCTAT CTGGCGGACG TGCTGGATCT CTTTTGTCTG TTGTGGATCG CACCGTCACT
CCGGGCGGCG CCCGACTGCT CGAACAACGC CTTTCCAGCC CCTCTCGCAA TCTCGACGTG
ATTTCCGCGC GCCTCGAGGC TCTGGATACG ATCGTCGAAG ACCCCATTCG CTGTGATACG
TTGCGTGGCC TTCTCCGCAA AACACCTGAT ATCGACCGCG CGCTTTCGCG CCTTGCGCTT
GATCGGGGCG GACCACGCGA CCTCGCTGCC ATTCGCAACG CCCTGAGCCA AGGCGAAGAC
ATCGAACGGG CACTACAGGA TCCGGATCTG CCGACCCTGC TGCGCGATGC GGCACACTCC
CTCGAAGGGT TCCAAGATCT GCTCTCCCTC CTCGATGCCG CCTTGATCGC CGAGCCCCCC
CTGCTGGCCC GTGATGGCGG CTTTATCGCA GCAGGCTATG ATCGCGAACT CGATGAAGCG
CGCACCCTCA GAGATGAGGG CCGCTCTGTC ATCGCAGGTC TGCAGAAAAA ATATGCAGAG
CATACGGGAA TCAGCTCACT CAAGATCAAG CACAACAATG TGCTTGGCTA TTTCATTGAA
ACCACATCGA CGCACGCCGC AAAGATGCAG TCAGCGCCGA TGTCAGACAC CTATATTCAT
CGTCAAACCA CCGCAAACCA AGTCCGTTTC ACAACCGTGG AACTAAGCGA AATCGAGACC
AAGATTCTGA ACGCCGGAAA TCTGGCGCTT GAGATCGAAA AACGGCTCTA TCAAAGGCTT
TCTGGCGCTA TTCTAGACAG CGCTGCGCGG CTCAATCAGG CCGCGCGCGG GTTTGCCGAG
ATCGATTTGG TCACCGCATT GGCAGATCTT GCACGCGCGG AAAACTGGAC CCGACCGCGC
GTTGATACAT CTCGTGCGTT TCACGTGGAC GGCGGACGTC ATCCGGTTGT GGAACAAGCG
TTGCGCCATC AAGGCGGTGA CAGCTTTGTG GCGAATGACT GTGATCTCAG CCCTCAAGAC
GGAGCAGCGA TCTGGCTTCT CACCGGGCCC AACATGGCCG GTAAATCGAC CTTCTTGCGT
CAGAACGCCC TGATTGCCGT GCTTGCTCAA ATGGGCAGCT ATGTCCCCGC AGAAGCAGCT
CATATCGGCA TGATCAGCCA GTTGTTCAGC CGCGTTGGCG CATCAGACGA TCTCGCGCGT
GGACGCTCGA CCTTTATGGT GGAAATGGTA GAGACCGCTG CCATTCTGAA TCAGGCCGAT
GATCGCGCAC TGGTGATCCT TGATGAAATC GGGCGTGGCA CGGCAACCTA CGATGGCCTA
TCGATCGCCT GGGCGACGCT CGAACATCTG CATGAGGTCA ACCGCTCCCG GGCGCTCTTT
GCAACGCACT ATCACGAATT GACGCAACTC GCGACAAAAC TCACCGGTGT CGAGAATGCA
ACCGTCTCGG TCAAAGAGTG GGAAGGCGAA GTCATCTTCC TGCATGAGGT CAAAAAGGGC
GCAGCGGATC GTTCCTATGG TGTGCAGGTG GCACAGCTTG CCGGTCTACC TGCCTCGGTC
GTGGCACGGG CGCGCAGCGT CCTCGATATG CTGGAGAAAA GCAGCCGCGA AGGTGGCGGT
GCCGGAAAGG TACAAATCGA TGACCTGCCG TTGTTTGCAG CCGCGCCAGC GCCGCAGCCC
AAACCCGCCC AAGGCCCCTC GCCGGTAGAA AAGCTCCTCG AAGAGATCTT TCCCGATGAC
CTCACCCCAC GTGAAGCACT CGAAACACTC TATCGGCTCA AGGACGTAAG CAAGGGTTAA
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| Protein sequence | MSVTPMMAQY LEIKAQYPDA LLFYRMGDFY EMFFEDAVNA AEALDIALTK RGKHEGEDIP
MCGVPVHAAE GYLLTLIRKG FRVAVGEQLE SPAEAKKRGS KSVVKRDVVR LVTPGTLTED
SLLEARRHNF LVAYSELRDQ AALAWADIST GAFHVMPVAR VRLSPELARL APSELIVADG
PIFDATLPLA EEYKIPLTPL GKASFDSTAA EKRLCHLFNV SALDGFGTFN RAEISAMGAV
VDYLEITQKG KLPLLQPPLQ ESEDRTVQID ASTRRNLELT RSLSGGRAGS LLSVVDRTVT
PGGARLLEQR LSSPSRNLDV ISARLEALDT IVEDPIRCDT LRGLLRKTPD IDRALSRLAL
DRGGPRDLAA IRNALSQGED IERALQDPDL PTLLRDAAHS LEGFQDLLSL LDAALIAEPP
LLARDGGFIA AGYDRELDEA RTLRDEGRSV IAGLQKKYAE HTGISSLKIK HNNVLGYFIE
TTSTHAAKMQ SAPMSDTYIH RQTTANQVRF TTVELSEIET KILNAGNLAL EIEKRLYQRL
SGAILDSAAR LNQAARGFAE IDLVTALADL ARAENWTRPR VDTSRAFHVD GGRHPVVEQA
LRHQGGDSFV ANDCDLSPQD GAAIWLLTGP NMAGKSTFLR QNALIAVLAQ MGSYVPAEAA
HIGMISQLFS RVGASDDLAR GRSTFMVEMV ETAAILNQAD DRALVILDEI GRGTATYDGL
SIAWATLEHL HEVNRSRALF ATHYHELTQL ATKLTGVENA TVSVKEWEGE VIFLHEVKKG
AADRSYGVQV AQLAGLPASV VARARSVLDM LEKSSREGGG AGKVQIDDLP LFAAAPAPQP
KPAQGPSPVE KLLEEIFPDD LTPREALETL YRLKDVSKG
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