Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2871 |
Symbol | |
ID | 4076405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 3039723 |
End bp | 3040337 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638008200 |
Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
Protein accession | YP_614865 |
Protein GI | 99082711 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.302745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.17342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGA AATTTAACGG CGACACTCTG CTCGTCGCCA CCCACAACGA AGGCAAACTA GGCGAGATCA CCGAGATCCT CGCCCCCTTC GGTGTCAAGG TTGTGGGTGC CGGCGAGTTG AACTTGCCCG AACCCGAGGA AACCGAGGAC ACCTTTGTCG GGAACGCCCG CATCAAGGCA CATGCTGCAG CCAAGGCAAC GGGCCTCCCG GCGCTGTCGG ATGACAGTGG GATCACCATC GACGCTTTGG ACGGAGCGCC CGGGGTATAC ACCGCTGACT GGGCCGAGAC CAACAACGGG CGCGATTTCA TGAAGGCGAT GACCCGCGCC AATGATGAAA TTACCGCAAA AGGTCCCGAT GCCCCGCGCA CGGCGCAGTT CCGTTGCACC TTGGTCCTCG CATGGCCTGA TGGTCATGAC GAAGTCTTCG AGGGCGTCAT GGCCGGAAGC CTCGTCTGGC CGATCCGAGG CGAAGGTGGC TTTGGCTATG ATCCGATGTT CATGCCCGAA GGCTACGATG TGACCTGCGC ACAACTCGAC AAAGACGAGA AAAACCGCAT AAGCCACCGC GGTCGGGCCC TCGCAAAATT TGTGCAGGGT TGCTTTGGTG GATGA
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Protein sequence | MTRKFNGDTL LVATHNEGKL GEITEILAPF GVKVVGAGEL NLPEPEETED TFVGNARIKA HAAAKATGLP ALSDDSGITI DALDGAPGVY TADWAETNNG RDFMKAMTRA NDEITAKGPD APRTAQFRCT LVLAWPDGHD EVFEGVMAGS LVWPIRGEGG FGYDPMFMPE GYDVTCAQLD KDEKNRISHR GRALAKFVQG CFGG
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