| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2860 |
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| Symbol | aroE |
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| ID | 4076394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3028986 |
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| End bp | 3029816 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008189 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_614854 |
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| Protein GI | 99082700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.928598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.516476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGA ACAGGATCCC GCTTGCTGGT GTGATTGGCT GCCCGATTGC CCATTCAAAG
TCTCCTCAGT TGCACCGTCA CTGGCTCAAG ACTTATGGAG TCGACGGACA TTACATGCCG
ATGCACGTGG AACCAGAGGA TCTGGAGTCC GTTGTCCGCA TGATGCCACG AATGGGATTT
GTAGGCGCGA ATGTGACAAT CCCGCACAAG CAGTCGATCA TGGAAATCGC CGACAAGGTG
ACGGATCGTG CAAAATTGAT GGGCGCGGCG AACACTCTGA TTTTTCACGA AGATGGCGCC
ATCGTTGCCG ACAACACGGA TGGATATGGT TTTATTACCA ACCTCCATGA AGGCGCGCCA
GATTGGGACG CAAAATCGGG GCCTGCGACC GTTTTTGGCG CGGGAGGTGC CAGCCGCGCC
GTGATCGCAT CGCTGATTGA GGCCGGCGTT CCCGAGATCC GGCTCACCAA TCGAACCCGC
TCCCGCGCTA AAGAAGTGGC GCAGACATTT GGGTCGAAGG TCACTGCCGT GGACTGGGTG
GAGGCCGGGA ATGTGATCGA GGATGCAAGT CTCGTAGTGA ACACCACGTC TCTTGGAATG
ACAGGCCAGC GTCGTTTGCG GGTGCCACTG GATGGGTTGC ACTCTGGTAT TGTGGTCACG
GATCTTGTCT ATAACCCCCT CAAAACGGAG CTTCTGCAGG CCGCCGAAGA GGCTGGGTGT
ACTGTGGTTG ATGGTCTGGG CATGTTGTTG CATCAGGCCG TACCGGGCTT TGAACGCTGG
TTTGGTCAAC GCCCTGAGGT CAACAGCGCC GCGCGTGACG CTATTCTTTG A
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| Protein sequence | MTENRIPLAG VIGCPIAHSK SPQLHRHWLK TYGVDGHYMP MHVEPEDLES VVRMMPRMGF
VGANVTIPHK QSIMEIADKV TDRAKLMGAA NTLIFHEDGA IVADNTDGYG FITNLHEGAP
DWDAKSGPAT VFGAGGASRA VIASLIEAGV PEIRLTNRTR SRAKEVAQTF GSKVTAVDWV
EAGNVIEDAS LVVNTTSLGM TGQRRLRVPL DGLHSGIVVT DLVYNPLKTE LLQAAEEAGC
TVVDGLGMLL HQAVPGFERW FGQRPEVNSA ARDAIL
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