| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2849 |
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| Symbol | |
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| ID | 4076668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3019981 |
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| End bp | 3020538 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008178 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_614843 |
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| Protein GI | 99082689 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.303381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGG ATCAATTCCC CGGCTGGCAT GGCACAACCA TCATCGGGGT GCGCAAAGGG
GACGAGGTAG TCGTCGCAGG GGACGGTCAA GTCTCGCTCG GTCAGACCGT GATCAAGGGC
AGTGCCCGCA AGGTGCGCCG CCTGTCGCCC GGCGGATATG ACGTGGTGGC AGGCTTTGCC
GGATCGACGG CGGATGCCTT CACCCTCCTT GAGCGGCTCG AAGCCAAACT GGAGGCAACG
CCAGGACAGC TTCAGCGCGC GAGTGTCGAG CTCGCCAAGG ACTGGCGCAC CGACAAATAC
CTGCAAAAAC TAGAGGCAAT GCTGATCGTC ACCGATGGCA AGGATCTCTA TGTCATCACC
GGCGCTGGCG ATGTGTTGGA ACCAGAACAT GATGTGGCCG CCATCGGGTC TGGCGGCAAC
TTTGCCCTGG CAGCGGCGCG CGGCATGATG GACAGCGACC GCGACGCAGA AACAGTGGCC
CGTGACGCAA TGGCGATCGC CTCTGACATC TGCGTCTACA CCAACGGCAA CCTCACGGTG
GAGCGCATCG GCAAATGA
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| Protein sequence | MAEDQFPGWH GTTIIGVRKG DEVVVAGDGQ VSLGQTVIKG SARKVRRLSP GGYDVVAGFA
GSTADAFTLL ERLEAKLEAT PGQLQRASVE LAKDWRTDKY LQKLEAMLIV TDGKDLYVIT
GAGDVLEPEH DVAAIGSGGN FALAAARGMM DSDRDAETVA RDAMAIASDI CVYTNGNLTV
ERIGK
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