Gene TM1040_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2847 
Symbol 
ID4076666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3019090 
End bp3019410 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content60% 
IMG OID638008176 
Productthioredoxin 
Protein accessionYP_614841 
Protein GI99082687 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.300873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCG TAGCCGTTAC CGACGCCACC TTCGACGCCG AAGTCAAGAA TTCCGATGTC 
CCCGTTGTGG TGGACTTCTG GGCCGAATGG TGTGGCCCGT GCAAACAGAT CGGCCCCGCT
CTGGAAGAGC TGGCAGCCGA GTATGGCGAC AAGGTAAAAA TCGCCAAGGT TGATGTCGAC
AGCAACCCGA ATGCCGCTGC TGCCATGGGT GTGCGCGGCA TTCCAGCTCT GTTCGTGTTC
AAGGATGGTC AGGTGGTTTC CAACCGCGCC GGCGCCGCTC CCAAGGCCGC GCTCAAGAGC
TGGATCGACG AATCCATCTG A
 
Protein sequence
MSTVAVTDAT FDAEVKNSDV PVVVDFWAEW CGPCKQIGPA LEELAAEYGD KVKIAKVDVD 
SNPNAAAAMG VRGIPALFVF KDGQVVSNRA GAAPKAALKS WIDESI