| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2845 |
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| Symbol | |
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| ID | 4076664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3012733 |
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| End bp | 3015666 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008174 |
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| Product | hypothetical protein |
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| Protein accession | YP_614839 |
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| Protein GI | 99082685 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.786725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATC CGTCTCAAAC CAAACCCAGG CTGTTTGCGG TCCCTTGTGG TGTAGATTTC
CCACGCGCAC TTTATGACGG ACTCACTGCC CGTTTTGCCG ATGCCCTCCC GGAAGAGTTG
GCACGGGTCG AGTTGATCCT CAACACGGAA CGCATGCAAC GCCGCGTGCG GCAGTTGTTT
GACGCAGGAC CAGCGCGTCT CTTGCCTCGC ATCTCGCTCC TGTCGGGATT GAACAAAGAA
GCAAATCTAC GTGGCCTGCC ACCTGCACTG CCTCCGCTGC GCCGCCGTCT GGAGCTTTCG
CAGTTGATCG CAAAGCTACT GGATGCGCAG CCCGATTTGG CTGCTCGCGC CTCGCTTTAC
GATCTTTCCG ACAGCCTGGC CGAATTGATC GACGAGATGC AGAGTGAAGG CGTGAGCACC
GATCAGATCC GCGCGCTTGA TGTGTCTGAT ATGTCCGGGC ACTGGAAACG GGCGCAGGAC
TTCATCGGCA TCGCGGATCA ATTTGTGGAC ATGCACGAAG GTGCGCTCGA CGTGAATGCC
CGGCAGCGGC AGGTTGTGAT GGATCTGATC GCAGAATGGG AACAGACGCC ACCAACGCAT
CCCATCATTT TGGCAGGCTC AACCGGGTCT CGGGGCACGA CGCTTCTTCT GATGGAGGCG
ATTGCTCGCC TACCACAGGG CGCGGTCGTC TTGCCGGGAT TTGATTTTGA CCAGCCAGAA
CCCGTCTGGG AGAGCCTGAC AGATGGGTTG GTTGCGGAAG ATCATCCGCA ATACCGGTTT
CACAAACTGA TGCGCGACCT TGATCTACGC CCCTCGGATA TTTGCCGCTG GGTTGATACA
ACGCCCCAAT CTCCTGCTCG CAATCGGTTG ATTTCTCTCG CACTTCGCCC AGCTCCGGTG
ACGGATGCCT GGATGAGTGA AGGCCCCTAC CTCAAAGATC TGGACCAAGC CACAGAGGCG
CTGACGCTGG TGGAGGCCGC AAATCCCCGA AGCGAAGCCT TGGCTATCGC TTTGCGCCTG
CGTCAGGCAG CCGAGGACGG TCAGACCGCA GCCCTGATCA CGCCCGACCG CATGCTGACA
CGCCAGGTCT CTGCCGCGCT GGATCGCTGG GACATTCTGC CAGACGATTC TGCGGGATTG
CCGCTTCAAT TGTCGCCCCC TGGACGGTTT CTGCGACATG TGGCCGATCT GTTTTGTCGC
CCTCTTCAGG CCGATATGTT GCTCACGCTT CTCAAGCATC CGCTCACCCA TTCCGGCGCG
GAGCGAGGTC TGCATTTGCT GCACACCCGT GATCTGGAGC TCCATATGCG CCGCAACGGA
CCGCCCTTCC CGGACTGCGA GAGCCTCAGT GCCTTTGGGA GCACGCGCGA TTTGCAGCCG
GGTTGGTCAG ATTGGCTAGC GCAGAGCTTT GCCGGTCGAG ATCGGACGGG CACGCGCGCC
CTGAGTGACT GGGTGTCAGA TTTGCGTGAG ACCGCCGAAG GGATCGCAGC AGGATCGCAG
GTCGGCGGCA CGGGCGAGCT CTGGGACAAA AAAGCAGGGA ACGCAGCGCG CGACGTTCTT
GAGGAATTGC AGGCACAATC ACCTCACGGT GGCGACATGA CCGCGCGCGA TTTTGCAGAC
CTCCTGGGCG CACTCTTGTC GCAGGGCGAG GTGCGGGATC GCGATGCGCC ATATGGATCC
ATTATGATCT GGGGCACGCT CGAGGCCCGC GTGCAAGGCG CCGATCTTGT TATCCTCGGT
GGTCTCAACG AGGGGAGCTG GCCAGAAGCC GCGCGTCCTG ATCCCTGGCT CAATCGTAAA
TTGCGCCACG AGGCAGGCCT TTTGCTGCCA GAGCGGCGCA TTGGCCTATC CGCACATGAT
TTTCAGCAGG CTGTCGCAGC GCCCGAAGTC TGGCTCACGC GTGCTGTCCG CTCCGAAGAG
GCCGACACGG TCCCGTCGCG CTGGCTCAAC CGTATGACTA ACCTTCTGGG AGGTCTACCG
GATCAGGGCG GACAAGCCGC GCTGTCGGCC ATGCGAATGC GCGGCCAGGT CTGGCTGGAT
TGGGCAAGCG TTCTTGATGC GCCAGTGCCA ACCCCTCTGA GCCCACGCCC CTCGCCGCGC
CCGCCAGTTG CAGCACGGCC CCGTAGATTG ACGGTGACAG AAATTCCAAA ACTGATCCGT
GATCCTTATG CGATCTACGC CAAACATGTA CTGCGCCTGA AACCCGTGGA TCCGCTGCTG
CAGGAACCTG ATGCACTGCT GCGCGGCACA ATCATCCACA AGGTTTTGGA AGACTTTATA
AAATCCGCTC AAGAGCAGCC GGAAAATCTC TCGGCCCGTC ACTTCATCGA CCACGCTCGA
CGCGTCCTCG AAACCGAGGT GCCCTGGCCC GTTGCGCGCA CGCTTTGGCT AACCCGCCTA
AAGAAAGTGG CCGAAGATTT TGTCACCGGT GAACGACAAC GTCAGTCGCG GGCGCGCCCA
TCAGGGTTTG AGAAATCTGG CCAGGTCCGT CTTGATCCAC TTGATTTCGA AATCGCGGCC
AAGGCGGACC GGATCGATGT GGACGAGCGT GGCTTGCTCC ATCTGTATGA TTACAAGACG
GGCGACCCGC CTTCGGAAAA ACAGCAGAAA TCCTTTGAAA AACAGCTTCT GATCGAGACC
GCCATGGCCG AACAGGGCGC GTTTTCAGAC TATGGTGCGG CGCGGGTGGA GCGTGCGCTC
TATATCGGGT TAAAGCCTCC GGTGAAGGAG GTTGCCGCAC CCATTCTGGA CGAGCCACCC
GCAAAGGTGT GGGCGGAGTT GCGCAGTCTG GTTGAGGCGT ATTTCGACGC AGAGCAAGGC
TTTAGCAGCC GCCGAATGGT ACACCGGGAT GATTTTGCCG GGGATTACGA TCACCTTGCC
CGCTATGGCG AATGGGATCG CAGTTCGGAT CCGGTGCCGG AGGATTTGAC ATGA
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| Protein sequence | MFDPSQTKPR LFAVPCGVDF PRALYDGLTA RFADALPEEL ARVELILNTE RMQRRVRQLF
DAGPARLLPR ISLLSGLNKE ANLRGLPPAL PPLRRRLELS QLIAKLLDAQ PDLAARASLY
DLSDSLAELI DEMQSEGVST DQIRALDVSD MSGHWKRAQD FIGIADQFVD MHEGALDVNA
RQRQVVMDLI AEWEQTPPTH PIILAGSTGS RGTTLLLMEA IARLPQGAVV LPGFDFDQPE
PVWESLTDGL VAEDHPQYRF HKLMRDLDLR PSDICRWVDT TPQSPARNRL ISLALRPAPV
TDAWMSEGPY LKDLDQATEA LTLVEAANPR SEALAIALRL RQAAEDGQTA ALITPDRMLT
RQVSAALDRW DILPDDSAGL PLQLSPPGRF LRHVADLFCR PLQADMLLTL LKHPLTHSGA
ERGLHLLHTR DLELHMRRNG PPFPDCESLS AFGSTRDLQP GWSDWLAQSF AGRDRTGTRA
LSDWVSDLRE TAEGIAAGSQ VGGTGELWDK KAGNAARDVL EELQAQSPHG GDMTARDFAD
LLGALLSQGE VRDRDAPYGS IMIWGTLEAR VQGADLVILG GLNEGSWPEA ARPDPWLNRK
LRHEAGLLLP ERRIGLSAHD FQQAVAAPEV WLTRAVRSEE ADTVPSRWLN RMTNLLGGLP
DQGGQAALSA MRMRGQVWLD WASVLDAPVP TPLSPRPSPR PPVAARPRRL TVTEIPKLIR
DPYAIYAKHV LRLKPVDPLL QEPDALLRGT IIHKVLEDFI KSAQEQPENL SARHFIDHAR
RVLETEVPWP VARTLWLTRL KKVAEDFVTG ERQRQSRARP SGFEKSGQVR LDPLDFEIAA
KADRIDVDER GLLHLYDYKT GDPPSEKQQK SFEKQLLIET AMAEQGAFSD YGAARVERAL
YIGLKPPVKE VAAPILDEPP AKVWAELRSL VEAYFDAEQG FSSRRMVHRD DFAGDYDHLA
RYGEWDRSSD PVPEDLT
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