Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2821 |
Symbol | |
ID | 4076640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2985990 |
End bp | 2986793 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638008149 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | YP_614815 |
Protein GI | 99082661 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.184257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.392162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGC TGCAGTTGAT CCTCGTTGCT CTGATTCAGG GTGTGACTGA ATTCCTCCCG GTTTCCTCGT CGGGACATCT GATTCTTCTG CCACGTCTCA CGGGGCTGGA GGATCAGGGG CAGGCGATTG ATGTTGCCGT GCATGTTGGC ACGCTTGCTG CGGTGGTCCT GTTTTTCTGG CGGGATGTGC GCGCTGGGCT CATCGGCCTG CCGCGCGCGC TGATTGGTCG GCTCGACACC AAAGGTGCGC GACTTGCGCT CGGCTTGATC GTGGCGACCA TTCCCACAGT GATTTTTGGC ACTTTCCTGT ATTTCACGGG TCTCAGCGAG TCCCTGCGCT CTGTCGCGGT CATTGGCTGG ACGATGCTGG TTTTTGGCGT CGTGCTTTAT ATAGCCGACC AACGCGGCCC TATCGATAAG TCCGCTTCGG ATTGGGGGGT GCGCGACGCA GTGATTATGG GTTTGTGGCA GATGCTGGCC TTGATCCCAG GCACGTCCCG GTCAGGCATC ACCATCACAG GCGCGCGCAG CCTCGGGTAC AATCGAGAGG ACGGCGCTCG GATTGCAATG TTGATGTCGA TCCCGACGAT TATCGCCTCA GGCGTGCTGC TCGGCACCGA GGTTGCACTG GACGCCGATG TTGATTTGAT GCGGGACATG GGGATTGCTG CGCTGCTGGC GATGGCCTCC GCCCTTGCTG CGCTTGCGTT GATGATGCGC CTTCTCAGGT CCGTGAGCTT CACACCCTAT GTGATCTATC GCGTGGCGCT CGGTATGGTG CTGTTGTTCA TCGCCTATGG CTAA
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Protein sequence | MPLLQLILVA LIQGVTEFLP VSSSGHLILL PRLTGLEDQG QAIDVAVHVG TLAAVVLFFW RDVRAGLIGL PRALIGRLDT KGARLALGLI VATIPTVIFG TFLYFTGLSE SLRSVAVIGW TMLVFGVVLY IADQRGPIDK SASDWGVRDA VIMGLWQMLA LIPGTSRSGI TITGARSLGY NREDGARIAM LMSIPTIIAS GVLLGTEVAL DADVDLMRDM GIAALLAMAS ALAALALMMR LLRSVSFTPY VIYRVALGMV LLFIAYG
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