| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2816 |
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| Symbol | |
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| ID | 4076635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2979365 |
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| End bp | 2980060 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008142 |
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| Product | ABC transporter related |
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| Protein accession | YP_614810 |
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| Protein GI | 99082656 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.792279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.584916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGGC TTGAAGATCT CGATATTCGC AAAGGCAGCT TTTGTCTGTC GGGCACGGCG
TCGATAGGCG CGGCCGACTC CGTGGCGGTT ATCGGGCCTT CGGGTGCCGG GAAATCCACC
CTGCTCGAGG CGATTGCGGG GTTTCAACCG TTGCACGCGG GTCAGGTCCT CTGGCGTGGC
GAGGATCTCA CTGCGCACAG GCCGGGACAA CGCCCGGTGG CGATGCTCTT TCAGGATGGC
AATCTATTTC CACACCTGAC CGTGCGCCAG AATGCCGGGC TTGGGATTGA TCCCAATCGG
AAGCTCAGGC CGAAGGAGAG GCAGACTGTG GAGGAGGCCA TTGCGCGTGT GGGGCTGGGC
GGCCTGGAGG AGCGCAAGCC AGCAGAGCTT TCGGGAGGGC AGCAAAGCCG TGCGGCGCTG
GCCCGGGTGT TGGTGCAAAG ACGCGATATT TTGCTTCTGG ACGAGCCGTT TGCGGCACTG
GGGCCGGCGC TCAAGGCCGA GATGCTCGAT CTCGTCAAGG AAATCACCTC TGAAAACGGT
GTCACCTTGT TGATGGTGAG TCATGATCCA GATGATGCGC GCCGCATTGC CGATCAGGTG
ATCCTGATAG CCGAAGGTCA ATTGTATCCT CCTGCGCCGA CGCATGCCTT GTTGGACAAC
CCGCCGCCAG CGCTTCGGGG ATACCTCGGA GCCTGA
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| Protein sequence | MLRLEDLDIR KGSFCLSGTA SIGAADSVAV IGPSGAGKST LLEAIAGFQP LHAGQVLWRG
EDLTAHRPGQ RPVAMLFQDG NLFPHLTVRQ NAGLGIDPNR KLRPKERQTV EEAIARVGLG
GLEERKPAEL SGGQQSRAAL ARVLVQRRDI LLLDEPFAAL GPALKAEMLD LVKEITSENG
VTLLMVSHDP DDARRIADQV ILIAEGQLYP PAPTHALLDN PPPALRGYLG A
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