| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2810 |
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| Symbol | |
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| ID | 4076578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2973760 |
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| End bp | 2975025 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008136 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_614804 |
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| Protein GI | 99082650 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.756102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.266811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG CGCCAAAATT CACAACGCTC GGCTGTCGGC TCAATGCCTA TGAAACAGAG
GCCATGAAGG AGCTCAGCCG CCAGGCGGGC CTTGAGGGTG CCGTAGTGGT CAATACATGT
GCCGTAACCG CCGAGGCAGT GCGCAAGGCG CGTCAGGAAA TTCGCAAACT GCGGCGCGAT
CACCCGGATG CGCCCATTAT CGTCACCGGA TGTGCCGCCC AGACCGAGCC GGAAACCTTT
GCCGCGATGA GCGAAGTCAC GCAGGTGATC GGCAACACCG AAAAGATGCA GCCCGAAACA
TGGCAGCGCA TGGCCAAGGG GCTGGATTTC ATCGGCGCCA CCGAAAAAGT TCTAGTGGAC
GACATCATGT CGGTGACAGA GACCGCAAGT CATCTGATTG ATGGGTTCGG GACGCGGTCC
AGGGCCTATG TGCAGGTCCA AAACGGCTGC GATCATCGCT GTACCTTTTG CATCATCCCC
TATGGACGCG GCAATTCCCG CTCCGTGCCT GCCGGCGTTG TTGTGGATCA GATCAAGCGT
CTGGTCGACA AAGGCTACAA CGAGGTGGTG CTGACCGGGG TCGATCTGAC CAGCTGGGGT
GCGGATTTGC CCGCAAGTCC CAAGCTGGGA GACCTTGTGA TGCGAATCTT GAAGCTCGTC
CCAGATTTGC CCCGTCTGCG TATCTCGTCG ATCGATTCGA TCGAAGTGGA CGAAAACCTG
ATGCAGGCCA TCGCCACAGA GCCACGCCTG ATGCCCCACC TGCATCTGAG CCTGCAACAT
GGCGATGATC TCATTCTAAA GCGGATGAAA CGGCGCCATC TGCGCGATGA CGCCATTCGG
TTCACGGAGG AAGCCCGCAA GCTGCGTCCG CAGATGACCT TTGGCGCGGA TATCATCGCC
GGCTTTCCGA CCGAAACCGA ATCGCATTTT GAAAACTCGC TCAAACTCGT AACCGAATGC
GACCTCACCT GGCTGCATGT CTTCCCCTAT TCCAAGCGCG AGGGAACCCC AGCCGCCAAG
ATCCCGTCAC AGGTCAATGG CAATGTGATC AAGGAACGTG CTGCGCGCCT GCGTGCCATC
GGCGAAGCAC AGATTGCCAG ACACCTCTCC GAGCAGATCG GTCGTCAACA TAGCATCTTG
ATGGAAAACC CTCACATGGG GCGCACAGAA CAGTTCACCG AAGTGCGCTT TGCCACACCA
CAGACCGAAG GCGCCCTCGT TCAGGCGCAG ATCACCGGGA GCGATGGGCT GCAGCTCACC
GCCTGA
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| Protein sequence | MSNAPKFTTL GCRLNAYETE AMKELSRQAG LEGAVVVNTC AVTAEAVRKA RQEIRKLRRD
HPDAPIIVTG CAAQTEPETF AAMSEVTQVI GNTEKMQPET WQRMAKGLDF IGATEKVLVD
DIMSVTETAS HLIDGFGTRS RAYVQVQNGC DHRCTFCIIP YGRGNSRSVP AGVVVDQIKR
LVDKGYNEVV LTGVDLTSWG ADLPASPKLG DLVMRILKLV PDLPRLRISS IDSIEVDENL
MQAIATEPRL MPHLHLSLQH GDDLILKRMK RRHLRDDAIR FTEEARKLRP QMTFGADIIA
GFPTETESHF ENSLKLVTEC DLTWLHVFPY SKREGTPAAK IPSQVNGNVI KERAARLRAI
GEAQIARHLS EQIGRQHSIL MENPHMGRTE QFTEVRFATP QTEGALVQAQ ITGSDGLQLT
A
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