| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2805 |
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| Symbol | |
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| ID | 4076573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2966243 |
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| End bp | 2968249 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008130 |
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| Product | hydantoinase/oxoprolinase |
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| Protein accession | YP_614799 |
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| Protein GI | 99082645 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.726576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAT TGCTTGGGAT CGACACGGGT GGGACTTACA CCGATGCGGT GTTGATCCGC
GATGAGTCCG AGGTGATTGC CTCGGCCAAA TCGCTCACCA CACGCGAGGA TCTTGCGATT
GGGGTCGGCG GCGCGGTCCG CGCGGTGTTG GCGCAGTCCG GTGTTGCGCC CGCGGATATT
TCCATGGCCG CATTGTCCAC TACGCTTGCA ACCAACGCAT TGGTTGAAGG GCAGGGCGGG
CGCGTGGCTT TGATCTACAT CGGCTTCAGC GCGCAGGATC TGGAGCGTCA CGGCCTGGAC
ACTGCGCTCA AGGGGGATCC GGTCCTGCTC CTCGCTGGTG GCCACACCCA TGCAGGTTCC
GAAGCAGCTG TGTTGGACAA AGAGGCTCTT ATCGCCTTTT TAGAGACTGA ATCTACTGGT
GTGAGCGGCT TTGCCGTTGC GGGCGTTTTT GCGACACGCA ATCCGGCCCA TGAATTGGAA
GTCGCGCGCC TCATTCAAGA GCACACCGGC GCGCCTGTAA CCTGTTCGCA TCAGCTCTCG
GCAAAGCTCA ATGGGCCCAA GCGGGCGCTG ACGGCCGTTC TGAATGCGCG GCTGATTGGG
ATGATCGACC GGTTGATCGG TCGTGCTGCG GATACGTTGA CGGCGCTGGG GGTGGAGGCG
CCGATGATGG TGGTTCGGGG TGACGGTGCC CTGATGTCCA CGGACCAGGC CCGCGCACGC
CCCATCGAGA CGATCCTCAG CGGGCCTGCC GCCTCCATTG TCGGAGCGCG ATGGATGACT
GGAGCAGAAA ATGCGTTGGT CAGCGATATC GGTGGCACCA CCACCGATGT TGCCTTGATC
GAACGCGGCC TGCCAAAGAT CGATCCGGAC GGTGCAGAAG TTGGCGGATA TCGCACCATG
GTCGAGGCAG TCGCCATGCG CACCACGGGG CTTGGAGGCG ACAGCGAAGT GCATTTGCAG
CGGGAAGGGC TGCGTGGTGG CGTTGCGCTG GGGCCGCGCC GGGTCTTGCC GATCTCCCTG
ATCGCCACGC AGGCGCCGGA AACCGTTCAT GCGGCGCTCG ACACACAGCT TCATGCGCAG
GTGATCGGGG AATATGACGG GCGTTTCGTG CGTGGCGTGA CCGGGCAACA AGCGCATGGT
CTGAGTGCGC GTGAGGAGGC TCTGTTGTCT CGGATCGGAC AGGATGTCCG TCCGCTTGGC
GAGGTGCTGC GATCGCGCGT GGACCAAAGT GCCCTGAGCC GACTGATCGA CCGTGGGTTG
GTGCAAATGG CCGGTGTGAC GCCTTCGGAT GCGAGTCACG CTCTCGGGCG GGTGTCGACC
TGGGATAATG AGGCGGCACA CAAGGCGCTG ACAATCTTTG CCAAGCGCCG CGTCGGGAGC
GGCGACATGG TTGCAAAGGA TGCGGACACG CTGGCCCAAA TGATCGTGGA TCAACTTACC
GAACAGACTG CATTGACCTT ATTAGAGTCT GTTTTCTCCG AAGAACGGGC TCTGTTTGGT
GGCAGTCCGT CTGATCTGGC GCGGCATGTT CTGCTGCAAC GGGGGCTTCA GGGGCACACC
GGGCTTGTGG CGCTTGATGC GCGGGTGAAT GTGGATGTGA TCGGATTGGG CGCATCAGCA
CCTAGTTATT ACCCGGCGGT GGGGGAGCGT CTACGCTGCA ATATGATCCT GCCTGAACAC
GCTGGTGTTG CAAACGCAAT CGGCGCCGTG GTCGGACGGA TTGTGCAGCG CCGTTCGGGC
ACTGTGACAG CCCCGTCCGA GGGTCGCTTT CGTGTACATC TGGCTGATGG CCCCGTGGAT
TTCACCGAGA GCGAAGCAGC ACTGACGGCG CTAGAATACG CCCTGCGCGC CGAGACCGTT
GCAGCCGCAG AGGAAGCCGG GGCAGGAGAT ATCCATGTGC ATGTGACCAA GGATCTGCGC
ACCGCAGAGG TTGAGGCGCG GCAGGTGTTT GTCGAGGCAA CCCTCACCGT AGAAGCAAGC
GGTCGCCCGC GTGTGGCACA TGCTTAG
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| Protein sequence | MAILLGIDTG GTYTDAVLIR DESEVIASAK SLTTREDLAI GVGGAVRAVL AQSGVAPADI
SMAALSTTLA TNALVEGQGG RVALIYIGFS AQDLERHGLD TALKGDPVLL LAGGHTHAGS
EAAVLDKEAL IAFLETESTG VSGFAVAGVF ATRNPAHELE VARLIQEHTG APVTCSHQLS
AKLNGPKRAL TAVLNARLIG MIDRLIGRAA DTLTALGVEA PMMVVRGDGA LMSTDQARAR
PIETILSGPA ASIVGARWMT GAENALVSDI GGTTTDVALI ERGLPKIDPD GAEVGGYRTM
VEAVAMRTTG LGGDSEVHLQ REGLRGGVAL GPRRVLPISL IATQAPETVH AALDTQLHAQ
VIGEYDGRFV RGVTGQQAHG LSAREEALLS RIGQDVRPLG EVLRSRVDQS ALSRLIDRGL
VQMAGVTPSD ASHALGRVST WDNEAAHKAL TIFAKRRVGS GDMVAKDADT LAQMIVDQLT
EQTALTLLES VFSEERALFG GSPSDLARHV LLQRGLQGHT GLVALDARVN VDVIGLGASA
PSYYPAVGER LRCNMILPEH AGVANAIGAV VGRIVQRRSG TVTAPSEGRF RVHLADGPVD
FTESEAALTA LEYALRAETV AAAEEAGAGD IHVHVTKDLR TAEVEARQVF VEATLTVEAS
GRPRVAHA
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