Gene TM1040_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2803 
Symbol 
ID4076571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2965204 
End bp2965653 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID638008128 
Productmethionine sulfoxide reductase B 
Protein accessionYP_614797 
Protein GI99082643 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.825598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.839793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGT ATTTCAAGAA CCCCGACGCC ATCGCTGCGC TGTCAGAAGA AGAATTCTAC 
GTCACACAGA ATTCTGGCAC CGAACGTCCC GGCACCGGCA AGCTCCTGTC CAACAAGGAG
CCCGGCATCT ATGTGGACAT CGTATCGGGC GAGCCGCTGT TTGCCTCTTC CGACAAATAT
GAATCAGGCT GTGGCTGGCC AAGCTTCACC AAGCCGATCG AACCCGCACA TGTGCAGGAA
CTCGAAGATC GCACCCTCGG CATGATCCGT ACCGAGGTGC GCTCTACCCA TGGCGACAGC
CACCTCGGCC ATGTCTTTCC CGACGGCCCT GCTGATCGCG GCGGTCTGAG ATATTGCATC
AACTCGGCGT CCTTGCGCTT TATTCACCTC GACGACATGG AGGCTGAAGG CTATGGCGCC
TACATCAACC AAGTGGAGGA CCACCGATGA
 
Protein sequence
MTKYFKNPDA IAALSEEEFY VTQNSGTERP GTGKLLSNKE PGIYVDIVSG EPLFASSDKY 
ESGCGWPSFT KPIEPAHVQE LEDRTLGMIR TEVRSTHGDS HLGHVFPDGP ADRGGLRYCI
NSASLRFIHL DDMEAEGYGA YINQVEDHR