| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2786 |
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| Symbol | |
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| ID | 4076554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2946434 |
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| End bp | 2947021 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638008111 |
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| Product | hypothetical protein |
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| Protein accession | YP_614780 |
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| Protein GI | 99082626 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.282235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGAG CGATGCTGGG ATATGTGCGG GTCGTCGATG CGGTGAATTA CCGGATCGGA
CGCCTGATGA TGTGGGGGCT CTTTGTGATG ATGGGGATCC TCTTGTGGTC CTCGATCTCC
AAGACCTTCT TTTTGCCCTC GCTCTGGACG CTGGAAATGG CACAGTTCGC GATGGTCACC
TATTACATAC TTGGTGGACC CTACTCGATC CAGATCGGGT CGAATGTGCG CATGGACCTA
TTTTATCACA ACTGGTCCAC CCGGCGGAAA GCCTGGTTTG ATGCCTTCAC CGTGCTGGCG
TTGATCACCT ACCTCGCCAT TCTCTTTTAT GGCGGTCTTG GCTCCACAGC CTATTCGCTG
GGCTACTGGG GTGACAATCC CTTTGCCTTC TTCTGGGGCC TAATCACAGG CGCCGAGGAG
GTGGGCCATA TGGAGCGCGC CTCGACAGCA TGGCGCCCCT TCATCTGGCC GATCAAATCG
ATCATGGTTT TCGGCTTCTT CATGATGCTG CTGCAAGCCA TCTCTGAACT CTTCAAAGAC
ATCGCCCGCC TCAAGGGCTA CGACATCCCA AGCGAGCGCC CCTCATGA
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| Protein sequence | MIGAMLGYVR VVDAVNYRIG RLMMWGLFVM MGILLWSSIS KTFFLPSLWT LEMAQFAMVT
YYILGGPYSI QIGSNVRMDL FYHNWSTRRK AWFDAFTVLA LITYLAILFY GGLGSTAYSL
GYWGDNPFAF FWGLITGAEE VGHMERASTA WRPFIWPIKS IMVFGFFMML LQAISELFKD
IARLKGYDIP SERPS
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