| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2773 |
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| Symbol | |
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| ID | 4076541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2925324 |
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| End bp | 2930771 |
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| Gene Length | 5448 bp |
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| Protein Length | 1815 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638008098 |
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| Product | alpha-2-macroglobulin-like |
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| Protein accession | YP_614767 |
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| Protein GI | 99082613 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.824984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCC TTTTGATTTT ACTCGTTTTT CTTTTTTCTA ATGTTCTTGG CTCTGTTGCG
ATTGCACAGA CAAGCGAATC TAAACCATTG CCAGCGCATC GGTTTGTGAC CCAACCCGAT
ACCGATCATT TCGGCGCTGA TCTTCAGGCA CTGTTTGATA CCTCGCTCGA AGCCTGCCAG
CGCGCTTGCG CGACTCAGGG GGCTTGTGTG GGATTCGTCT ACAATCTGAA ATCCAACGCC
TGTTTCCCCA AATCGGAACT CAGCGCGCCT TCGACCTTTG TGGGCGCGCT CACCGTGCGC
AAAGTACCTG TTGATTCAGA TCTGGCAGCG CGTGCGGCTG ATCGGGCATC CCGTTTGCCG
TTGCGAGGAG GTAACGATCT GTCCGCAGCG CGCACCCTCG CGAGCGACAT CGGGTCGCGA
TACCCCCTGA GCGGGCGTGA TCTCGGCGTT TTGGTTGACG GTTCGCAACA GTTCTTCGCT
GGCAACAATG CGACAATGGC CGCACGCTGG ATGGGCGAGG CGGTGGCCCT CAGCGATGCG
CCGGACCTCT GGGTGGAATA TGCGCGTTTC GTAAGGGCGA TACCGACAGA CCGTAGCAGC
GAGACCCGTC GCAATCTTGC CGAGGCGGCT TCGGCGGCGC TCAACGGCTA TTTACGCGCG
GATGCTGCGC CCTTGCAGGC AACCGCCCTC ACAGAAGCTG CACTTGCGCT GGAAAAACTC
GGACGTGGCC GCGACATGGT CTCCATGCTT CGGCTGGCGC AGGATATCGC TCCGCGTCAG
GATATTGCCG CTCTCTTGGA TCGCGCGGTA GCAAAATACG GGTTTCGGGT CAGTGATACG
CGGGTCGAAG CCGACAGTGC CGATCCGCGT ATATGCATCG TGTTCTCCGA AGAGCTGGCC
CAAACGGGTG TAACCTACGG CGATTATCTG AAATCCGACG CCAAGGGACT GGCCGCAGAG
GCTTCGGGGC AAGAGCTGTG TCTGACGGGA TTGACCCACG GCCAGCACCT CCGGGTGACG
CTGCGCCGTG GTCTGCCTGC AGCCAACGGT GAGGCGCTCG TGAAGGATGT GGACCTGCGT
CACTATATTC GCGACCGCAG TCCCTCGGTG CGCTTTCCCG GTCGGGCCTA TGTGCTCGCG
CGCAGCGATG TGACCGCCCT TCCGGTTGAA ACCGTAAATG TTGACATGCT CGACCTGAAA
CTCTCTCGGG TCAGCGATCG CAACCTTCTG CGCAGCATGC AGGACGATCT CTTTGCGCGC
CCGCTGAATC AATGGCAGAG CGAAAATTTT GACGCCACCC TGGCAGAAGT GCTCTGGAGT
GGCACTGCAG AGGTCCAGCA AGAGCTGAAC CGGGACATGA CGACCCGGCT GCCACTGAAT
GATGTGCTGG CGGATCAACC TGTTGGCATC TACGCCCTCA GCGCCTCGAT CCCGGGTGCG
GACCCTTATG ACAGCCCTGC GGCGATGCAG TGGTTCGTTC TGACTGACCT TGGCCTTAGC
TCCATGTCGG GGGCAGACGG CTTGCATGTG CAGGTGCAGG GGCTTTCCGA TGCCAAGGCC
CGCGCAGGGG TCGAGGTGGA GCTGATTTCC GAAGCCAATG CGGTGATTGC GCGAGCGACC
AGTGACGTCA CCGGGTATGC GCGCTTCGCG CCGGGGCTTA CACGCGGTAC GGGAAGCGCT
GCACCGGCGA TGCTGCTGGC GCGCGCAGGT GAAGAGGATT TTGCCTTCTT GTCGCTGCGG
GATGCGGGGT TTGATCTCTC TGATCGCGGT GTCGAGGGGC GGCCTGCGCC GGGGCCAGTG
GATGTCTTCC TGACCACCGA TCGCGGAGCC TATCGTGCTG GTGAAACCAT CAATGTCACC
GCTCTGTCTC GCGATCCTCG CGCACAGGCC ATCGAGGGAC TGCCGCTCAT CGCAGTGCTG
AAACGTCCGG ATGGTGTTGA ATATTCGCGC CATATCTCAG ACGGCGGCAG TGCAGGCGGA
CATGTCTTTG CCCTGCCCGT CGGGGACAGT GTGCCGCGCG GCTCCTGGAG CGTTGAAATC
TACACGGACC CCAAGGCTGA CCCACTCGCC CGCCAAACCG TTCTTGTGGA GGACTTTCTG
CCGGAGCGTA TTGATTTCGA ACAGGAAATT CGCGACGTGG CGCGCCTGCG TCCAGGCGGG
CAGATGGTTG TCGATGTAAA AGCGCGCTTC CTGTTCGGAG CGCCGGGTGC AGGTCTGAGT
GTCGAAGGCG ATGTTTCGCT CAGCCCGGTA CGCCAACTCT CTGATTGGCC CGGTTACCGT
TTTGGGCGCT ATGATGCGGA GACCACCCGC CAGACCCGTT ATTTCAGCGC CGATGACACC
GACGCCCAGG GGCGCGCTGT TGCGACCGGT GACCTGCCCG ACATCGAGGC AGCAGGCCTT
CCGCTTGAAG CGCGGCTGCG GCTCAGGCTT GCGGATGGCT CCGCACGCCC GGTAGAGCGC
GCGCAGACCG TGCCCGTGCG CCCCGCAACC CCTGTGATCG GGCTTAAGGC TCAGTTTGCA
GATGACGTGG TCGCCGAAGG CACCGAGGCT GGTTTCGAGC TGGTCGCTCT GGGGCCGGAT
CTCAGTCCCA TGCCAATGCA GGTGCAATGG GTGATGAATC GCGTAGAGAC GCGCTATCAG
TGGTATCAGC TTTATGGCGA TTGGCAGTGG GAGCCGATCA CGCGCCGCAC CCGCGTAGCC
TCGGGCGAAG CCATGCTGGG CAGTGAGCCG GTGGCGATCA CAGCGCCCGT GGACTGGGGA
CGTTACGAGC TGGTGGTGGA ACGCCTGGAT GGCGAATATG TCACTGCGGC GCAGGATTTC
TATGCGGGGT GGTACGTGCC CGCATCCGAT GCGCAGACTC CGGATCGATT GGAACTGTCA
CTGGACCGTG AGAGCTACGC CCCCGGTGAC ACTGCGCGTC TGCGCATCGT GCCACAAACG
GCAGGAACCG CGCTGATTTC TGTCATGGGA AGCGAGTTGA TCCATCGACA AGCGGTCGCA
GTGAAGGCGG GGGAAAATGT GATCCCGCTT GAGGTCACCT CCGAATGGGG CAGCGGGGCC
TATGTCAGCG CCTCTGTGGT GCAGCCGGTT GCCAGCCGTG AGGGGCGGAC GCCAACCCGT
GCCCTGGGCA TCGCCCATGC GACAGTGGCG CAGCCGGGGC AGGAGTTGGA TGTCGCCATC
ACCGTGCCAG AGATCACTCG CCCACGCCAA ACGATCGAAG CGACCGTGAA GGTTGCAGGT
GCCGACGCAG GAGAAGAAGT CTGGCTGACG CTCGCCGCCG TGGATGTTGG TATCTTGAAC
CTCACCGGCT ATCAGAGCCC GGACCCGGTA GGATATTTCC ACGGCCAACG GCGTCTCGGG
ATGGAACTGC GCGATATCTA TGGCCGTCTC ATTGATCCGG GCAACGGCGC CTTGGGGCGC
GTGCGCTCTG GAGGGGACGC GGGCCTTGGT GGGCAATTTC AATCTCCGCC TCCGACACAG
GATCTGATGT CGGTCTTTCA CGGCGCTGTC AAAGTGGATG AAACCGGCAG CCTGCGCTTG
CCGATCACAT TGCCCGACTT CAATGGCACT GTACGTTTGA TGGCGGTGGC CTGGACGGAT
CGATCCGTGG GGCAGGCTGA GGCCGATATG GTCGTACGAG ACCCTGTCGT GCTGACAGCC
TCGCTGCCAC GTTTCCTCGC CCCGGGAGAT CAGAGCCGCA TCCGGCTTGA TATTACCCAT
GCCGACGGGC CGGCAGGCGA GGTTGGGCTG GCGGTCGACG TCCGTGGAGC GGGCGTGCGC
CTCGGTGCTG TCCCTGCCTC TGTGGGCCTT GCTGAGAAGG GCCGCGTTAT CCTTGAGGTG
CCAGTGACGG CAGACGCGGT CGGGGATCCC GAGCTGCGGC TCAGTCTGAC AACGCCGGGC
GGTGCGGTTC TCGAGCAAAT GCTGCGGTTG CCCGTGCGGG CCAATGACCC AGAGGTCTCG
GAAACTCGGC GCTTCTCGCT AGCGAGCGGA GACAGCTTCC TCTTCAACGC AGATGTGTTC
GAAGGGCTGA GGCCGGGATC TGCGCGGGCA GTGATGTCTG CGGGTCCTTT GGCGAAGTTC
GATGTGCCAG GTTTGCTGGC GCAGCTTGAT GGCTACCCCT ATGGCTGCAC CGAGCAGGTC
ACCTCCAAAG CGCTACCCTT GTTGTACCTG TCTTCCGTCG CGGATGCCGC TGGCCTCGGG
GATCGTCCGA AAGTCGATGC CCGTATCAAC AGCGCGATCC GCAAGGTGCT AACCCGGCAG
GCCGCGAACG GAGCGTTTGG CCTGTGGCGT GCCGAGAGCG GCGATTTGTG GTTGGATGCC
TATGCTTCGG ATTTCCTGAG CCGCGCGCGC GCCAAAGGCT ATGTGGTTCC CGATCAGGCC
TTTGCCCGCG CGATGGATAA TTTGCGCAAC CGCCTGAATT ATGCGCCCGA CTTTGACAAC
GGCGGTGAAG AAATCGCCTA TGCGCTCCTG GTGCTGGCGC GGGAGGGGGC TGCCGCAATG
GGGGATCTGC GCTACTACGC CGATGTGAAG GCAGAGGCCT TCTCGACCCC GATGGGAGCG
GCCCAGCTTG GGGCCGCGTT GGCGGCTTAC GGGGATCAGC GCCGCGCGGA CAAGATGTTT
GCCCGCGCCG CGCAGATGAT CGCGGGCCAG GGGGCGGAAC AGCCTTTGTG GCGTGTAGAT
TACGGCACTC AACTCCGCGA CACGGCCGCA GTTCTGGCGC TTGCAGTCGA GGCTGGCAGT
GCGGCCGTCA ATCGCGACTA CCTCACCGCG CGCGTTGCGG ATAGCGATGG TCTGCGCTCC
ACTCAGGAGG CAGCTTGGAG CTTGCTGGCG GCGCAGGCCT TGGTCGACGC CCCCGAGGAC
TCGGGGCTGC GTGTGAATGG CCAGCCTGTT GCCGGAGCAT TTGTCGAGGT GATGGCAGGG
GGCAGCCCAA AAGAGCTGTC GGTGACGGCC GCCTCTGGGC GCAGCACCGA CATCACGTTG
ACGCGGATCG GGGTGCCCGT CGTGCCGCCG GCTGCGCGGG GCTATGGCTT TGCTCTGACG
CGGGAGTATT ACACTCTCGA AGGGGCGCCG GTCGATCTGA CAGAGGTCGA TGTTGGAACA
CGGTTGGTGA CGGTTCTGCG GGTCTTGCCA CAGGAAGACA TTGGCGCACG TTTGATGGTG
AATGATCCGC TTCCGGCCGG TCTTGAAATC GACAATCCGA ATCTGCTGCG CTCGGGCGAT
CTTAGGGATC TGGATTGGCT GAGCCTCTGG GACGCGGATC ATGCTGAGTT CCGATCTGAC
CGTTTCCTTG CGGCGGTGAC GTCGCGGGGC ACGGACCCGA TCACGCTGGC CTATATGGTG
CGCGCGGTGA GTCCCGGGTC CTTCCACCAT CCCGCGGCCT CGGTCGAGGA TATGTACCGG
CCTGCCTATC GCGCCAATAC CGCGGCAGGA CGTTTGCAGG TGCGATGA
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| Protein sequence | MQRLLILLVF LFSNVLGSVA IAQTSESKPL PAHRFVTQPD TDHFGADLQA LFDTSLEACQ
RACATQGACV GFVYNLKSNA CFPKSELSAP STFVGALTVR KVPVDSDLAA RAADRASRLP
LRGGNDLSAA RTLASDIGSR YPLSGRDLGV LVDGSQQFFA GNNATMAARW MGEAVALSDA
PDLWVEYARF VRAIPTDRSS ETRRNLAEAA SAALNGYLRA DAAPLQATAL TEAALALEKL
GRGRDMVSML RLAQDIAPRQ DIAALLDRAV AKYGFRVSDT RVEADSADPR ICIVFSEELA
QTGVTYGDYL KSDAKGLAAE ASGQELCLTG LTHGQHLRVT LRRGLPAANG EALVKDVDLR
HYIRDRSPSV RFPGRAYVLA RSDVTALPVE TVNVDMLDLK LSRVSDRNLL RSMQDDLFAR
PLNQWQSENF DATLAEVLWS GTAEVQQELN RDMTTRLPLN DVLADQPVGI YALSASIPGA
DPYDSPAAMQ WFVLTDLGLS SMSGADGLHV QVQGLSDAKA RAGVEVELIS EANAVIARAT
SDVTGYARFA PGLTRGTGSA APAMLLARAG EEDFAFLSLR DAGFDLSDRG VEGRPAPGPV
DVFLTTDRGA YRAGETINVT ALSRDPRAQA IEGLPLIAVL KRPDGVEYSR HISDGGSAGG
HVFALPVGDS VPRGSWSVEI YTDPKADPLA RQTVLVEDFL PERIDFEQEI RDVARLRPGG
QMVVDVKARF LFGAPGAGLS VEGDVSLSPV RQLSDWPGYR FGRYDAETTR QTRYFSADDT
DAQGRAVATG DLPDIEAAGL PLEARLRLRL ADGSARPVER AQTVPVRPAT PVIGLKAQFA
DDVVAEGTEA GFELVALGPD LSPMPMQVQW VMNRVETRYQ WYQLYGDWQW EPITRRTRVA
SGEAMLGSEP VAITAPVDWG RYELVVERLD GEYVTAAQDF YAGWYVPASD AQTPDRLELS
LDRESYAPGD TARLRIVPQT AGTALISVMG SELIHRQAVA VKAGENVIPL EVTSEWGSGA
YVSASVVQPV ASREGRTPTR ALGIAHATVA QPGQELDVAI TVPEITRPRQ TIEATVKVAG
ADAGEEVWLT LAAVDVGILN LTGYQSPDPV GYFHGQRRLG MELRDIYGRL IDPGNGALGR
VRSGGDAGLG GQFQSPPPTQ DLMSVFHGAV KVDETGSLRL PITLPDFNGT VRLMAVAWTD
RSVGQAEADM VVRDPVVLTA SLPRFLAPGD QSRIRLDITH ADGPAGEVGL AVDVRGAGVR
LGAVPASVGL AEKGRVILEV PVTADAVGDP ELRLSLTTPG GAVLEQMLRL PVRANDPEVS
ETRRFSLASG DSFLFNADVF EGLRPGSARA VMSAGPLAKF DVPGLLAQLD GYPYGCTEQV
TSKALPLLYL SSVADAAGLG DRPKVDARIN SAIRKVLTRQ AANGAFGLWR AESGDLWLDA
YASDFLSRAR AKGYVVPDQA FARAMDNLRN RLNYAPDFDN GGEEIAYALL VLAREGAAAM
GDLRYYADVK AEAFSTPMGA AQLGAALAAY GDQRRADKMF ARAAQMIAGQ GAEQPLWRVD
YGTQLRDTAA VLALAVEAGS AAVNRDYLTA RVADSDGLRS TQEAAWSLLA AQALVDAPED
SGLRVNGQPV AGAFVEVMAG GSPKELSVTA ASGRSTDITL TRIGVPVVPP AARGYGFALT
REYYTLEGAP VDLTEVDVGT RLVTVLRVLP QEDIGARLMV NDPLPAGLEI DNPNLLRSGD
LRDLDWLSLW DADHAEFRSD RFLAAVTSRG TDPITLAYMV RAVSPGSFHH PAASVEDMYR
PAYRANTAAG RLQVR
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