Gene TM1040_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2704 
Symbol 
ID4077011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2846327 
End bp2847790 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content64% 
IMG OID638008029 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_614698 
Protein GI99082544 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A 
TIGRFAM ID[TIGR02963] xanthine dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.299034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG GGCATGACAT CCGCTTTTTG CTGAACGGAG TGGAAAAGCG CGTATCCGAT 
GTGAAGGCAA CACTGACCTT GCTGGATTAC CTGCGCCTCG ATCAGCGCCT GACGGGCAGC
AAGGAAGGCT GCGCCGAGGG CGACTGCGGG GCCTGCACCG TTCTTGTCGG GCGGCTGCAC
CAGGGTCAGC TGCACTATGA GACCGTGAAC GCCTGCATTC GCTTTCTTGC GTCCCTCAAT
GGCTGTCACA TTGTCACCAT CGAGCATCTC TCGGGGCCGC AAGGGCGTCT GCACCCGGTC
CAAGAAGCCA TGGTCGACTA TCACGGCAGC CAGTGCGGCT TTTGCACGCC GGGTTTTGTG
ATGTCGCTCT ACGCGCTGTG GATGTCCAAC CCGGAGCCAT CGGTGCAGGA GGTCGAGACC
GCGATCCAAG GCAACCTCTG CCGCTGCACC GGCTACGAGC CAATCGTGAA AGCCGCAATG
GCGGTGACAC AGTATGGATC CCCCGCGCAT GACCATCTGG TGCGTGAACG GACCGATGTG
ACCGCGCGCC TGATGGCGCT GCAGCCCAGC GCACGCATTG TGACCGGCCC CGAGGATGAC
CGCGCGATCC TGCCGCTGGA TGTCGCGGAT CTGGCGCAGG TGCTGGCGGA AAACCCCAAG
GCAACGATCG TGGCCGGGTC CACCGATGTG GGACTTTGGG TCACGAAATT CATGCGCCCG
ATCTCGCCGG TGGTGTTCAT CACCCACCTC GAGGAGCTGA AATCCGTCGA GGTTACGGAG
GAGGCTCTGA CCCTTGGCGC GGGTGTGACC TATAGCGAGA GTGAGGCCGC AATCCGTGCG
GCGTTCCCGC ATCTGGGCGA CTACTGGGAC CGGATCGCTG GTTGGCAGGT GCGCAACATG
GGGACCATCG GTGGCAATAT CGCCAATGGC TCTCCTATCG GGGACACGCC GCCGGTGCTG
ATTGCGCTTG GGGCCGAAGT CGTGCTGCAA AGCGCGCGGG GCAGCCGGGT GTTGCCGCTT
GAAGACTTCT TTATCGACTA TGGCAAGCAG GACCGCGAGG CGGGTGACTT TGTTGCCGCG
ATCCGTATTC CGCGCGCAAA GCCGGGGCAG ATGGATGCGG CCTACAAGAT CTCCAAGCGG
CGGGACGAGG ATATTTCCTC GGTCGCGGCC GGGATCAGCG TATGCGTGAC CGATGGGGTC
ATCACCACGG CCCGGATCGC GTTTGGCGGC ATGGCCGCAA CCCCCAAACG CGCTGCCACC
GCCGAAGCCG CCCTCGTGGG GCAGCCATTT GCTGCGGCGT CTTTTGACGC CGCTGCCGTG
GCACTGGGCC AGGACTTCAC GCCGCTCAGT GACTGGCGCG CCAGCGCAGA CTACCGCATG
ACCGTCGCCG CGAACCTGTT GCGCCGGTTC TACCTCGAAC AAGACAGCAC CCAGGGCGCA
CCCGTGCGTC TGGCCATCGC GTGA
 
Protein sequence
MAQGHDIRFL LNGVEKRVSD VKATLTLLDY LRLDQRLTGS KEGCAEGDCG ACTVLVGRLH 
QGQLHYETVN ACIRFLASLN GCHIVTIEHL SGPQGRLHPV QEAMVDYHGS QCGFCTPGFV
MSLYALWMSN PEPSVQEVET AIQGNLCRCT GYEPIVKAAM AVTQYGSPAH DHLVRERTDV
TARLMALQPS ARIVTGPEDD RAILPLDVAD LAQVLAENPK ATIVAGSTDV GLWVTKFMRP
ISPVVFITHL EELKSVEVTE EALTLGAGVT YSESEAAIRA AFPHLGDYWD RIAGWQVRNM
GTIGGNIANG SPIGDTPPVL IALGAEVVLQ SARGSRVLPL EDFFIDYGKQ DREAGDFVAA
IRIPRAKPGQ MDAAYKISKR RDEDISSVAA GISVCVTDGV ITTARIAFGG MAATPKRAAT
AEAALVGQPF AAASFDAAAV ALGQDFTPLS DWRASADYRM TVAANLLRRF YLEQDSTQGA
PVRLAIA