Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2704 |
Symbol | |
ID | 4077011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2846327 |
End bp | 2847790 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638008029 |
Product | molybdopterin dehydrogenase, FAD-binding |
Protein accession | YP_614698 |
Protein GI | 99082544 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.299034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGG GGCATGACAT CCGCTTTTTG CTGAACGGAG TGGAAAAGCG CGTATCCGAT GTGAAGGCAA CACTGACCTT GCTGGATTAC CTGCGCCTCG ATCAGCGCCT GACGGGCAGC AAGGAAGGCT GCGCCGAGGG CGACTGCGGG GCCTGCACCG TTCTTGTCGG GCGGCTGCAC CAGGGTCAGC TGCACTATGA GACCGTGAAC GCCTGCATTC GCTTTCTTGC GTCCCTCAAT GGCTGTCACA TTGTCACCAT CGAGCATCTC TCGGGGCCGC AAGGGCGTCT GCACCCGGTC CAAGAAGCCA TGGTCGACTA TCACGGCAGC CAGTGCGGCT TTTGCACGCC GGGTTTTGTG ATGTCGCTCT ACGCGCTGTG GATGTCCAAC CCGGAGCCAT CGGTGCAGGA GGTCGAGACC GCGATCCAAG GCAACCTCTG CCGCTGCACC GGCTACGAGC CAATCGTGAA AGCCGCAATG GCGGTGACAC AGTATGGATC CCCCGCGCAT GACCATCTGG TGCGTGAACG GACCGATGTG ACCGCGCGCC TGATGGCGCT GCAGCCCAGC GCACGCATTG TGACCGGCCC CGAGGATGAC CGCGCGATCC TGCCGCTGGA TGTCGCGGAT CTGGCGCAGG TGCTGGCGGA AAACCCCAAG GCAACGATCG TGGCCGGGTC CACCGATGTG GGACTTTGGG TCACGAAATT CATGCGCCCG ATCTCGCCGG TGGTGTTCAT CACCCACCTC GAGGAGCTGA AATCCGTCGA GGTTACGGAG GAGGCTCTGA CCCTTGGCGC GGGTGTGACC TATAGCGAGA GTGAGGCCGC AATCCGTGCG GCGTTCCCGC ATCTGGGCGA CTACTGGGAC CGGATCGCTG GTTGGCAGGT GCGCAACATG GGGACCATCG GTGGCAATAT CGCCAATGGC TCTCCTATCG GGGACACGCC GCCGGTGCTG ATTGCGCTTG GGGCCGAAGT CGTGCTGCAA AGCGCGCGGG GCAGCCGGGT GTTGCCGCTT GAAGACTTCT TTATCGACTA TGGCAAGCAG GACCGCGAGG CGGGTGACTT TGTTGCCGCG ATCCGTATTC CGCGCGCAAA GCCGGGGCAG ATGGATGCGG CCTACAAGAT CTCCAAGCGG CGGGACGAGG ATATTTCCTC GGTCGCGGCC GGGATCAGCG TATGCGTGAC CGATGGGGTC ATCACCACGG CCCGGATCGC GTTTGGCGGC ATGGCCGCAA CCCCCAAACG CGCTGCCACC GCCGAAGCCG CCCTCGTGGG GCAGCCATTT GCTGCGGCGT CTTTTGACGC CGCTGCCGTG GCACTGGGCC AGGACTTCAC GCCGCTCAGT GACTGGCGCG CCAGCGCAGA CTACCGCATG ACCGTCGCCG CGAACCTGTT GCGCCGGTTC TACCTCGAAC AAGACAGCAC CCAGGGCGCA CCCGTGCGTC TGGCCATCGC GTGA
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Protein sequence | MAQGHDIRFL LNGVEKRVSD VKATLTLLDY LRLDQRLTGS KEGCAEGDCG ACTVLVGRLH QGQLHYETVN ACIRFLASLN GCHIVTIEHL SGPQGRLHPV QEAMVDYHGS QCGFCTPGFV MSLYALWMSN PEPSVQEVET AIQGNLCRCT GYEPIVKAAM AVTQYGSPAH DHLVRERTDV TARLMALQPS ARIVTGPEDD RAILPLDVAD LAQVLAENPK ATIVAGSTDV GLWVTKFMRP ISPVVFITHL EELKSVEVTE EALTLGAGVT YSESEAAIRA AFPHLGDYWD RIAGWQVRNM GTIGGNIANG SPIGDTPPVL IALGAEVVLQ SARGSRVLPL EDFFIDYGKQ DREAGDFVAA IRIPRAKPGQ MDAAYKISKR RDEDISSVAA GISVCVTDGV ITTARIAFGG MAATPKRAAT AEAALVGQPF AAASFDAAAV ALGQDFTPLS DWRASADYRM TVAANLLRRF YLEQDSTQGA PVRLAIA
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