| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2690 |
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| Symbol | |
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| ID | 4077601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2829620 |
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| End bp | 2831923 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008015 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_614684 |
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| Protein GI | 99082530 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.969151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATT CGGCACGGAA GAGGCAACAT CGCCCCGGCT GCAGCGTGCT TGCCGTCAAA
GCGCTGCCTG TTTCCATAGG CAAATGGTAT GAGTGCAAAC ACGAGATGAC GACTTATGTA
GTACACGGGA CGAATTACAA CGATCCCTCA TTTTGGGCCT CCATCTCTGA AGGCAGCCCC
GGCCATACGC TTGATTTCAC CGGGTTGCCG CCAAATTATG AAATCAACAT CAACGCCGAG
GCCAAAACGA TCTCGATCTG GGACGGGACG TCTTGGTATA GTGTCGGCGA AAGCGGCAAC
ACGGGCACCA ACGCCACTCT GGGTAGCCCC ACCCTTGTCG ATGATTTCAC TGTCATTCTG
GCGAACAATT CAGACGACTA CATCGAAGGC TCTGACAACA ATGACAGCCT CACGGGCGGT
ACCGGGAACG ATACCCTGTC CGGGGACCAA GGTGATGACA CCCTCAGAGG GGGTGACGGG
GATGACTATC TAACCGGTGG TGAAGGCAAC GACAATATCG ACGGTGGCAC CGGCAATGAC
ACCATCCGTG GCGACAATGC GTGGACGAAT ACCTCGTCAG GAGCCTCAGG CGCGAGCACA
ACCCCCACGA CGTTGACCGT CACCAACTCG GCGGATGGCC CGATCGAGCT GTGGTGGATC
GACGAGACCG GCACAGCCCA ATATTACGCC ACCCTTCAGC CCGGGGACAC CCGGAACCAG
AGCACCTTTG AGGAGCATAA CTGGATTCTG CGCCACCCGG ATGGCTGGTA TCTGGAGTAT
ATCGAGGGGG CTCCGAACCA GACTGTCAAT TTTGGCTCGG CCGGTTTGAA TGATACGGTC
TACGCGGGCG CTGGAAATGA TCTCATCGAT GGGATGTACG GCGATGACCT TCTCTACGGG
GAGGGGAACA ATGACACGAT CTATGGCGAT TACGGCTCCG ATACGATTTA TGGCGGGGCA
GGTGACGATC TTCTGTACGG GGGGGATGGC GACGATACCC TGGCTGGCGG TACCGGATCC
GACACGATGT ATGGAGGGGC CGGAAATGAC TCCATGGTGG GGTTCGATGA CGCCGATACC
TTCATTCTCG AGGATGGTTT TGGCAATGAC ACCATCGTGG GCGGCGAAGG CGGCACCGAT
GACGATTTTG TCGATCTCTC CAACCTGACC AGCGGGGTCA CCGTCACCTA TACCGGCGAT
GAGGCCGGGA CCATCACGGA TGGCAGCAAC ACGGCGGAGT TCTCGGAGAT CGAGCGGATT
CGACTCACGG ATCAGGCGGA TGTGCTGGAT GCAAGCGCCT CTTTGGTGGG GGTCGATGTG
GACGCCGGGG CCGGTGCGGA CACGCTGACC GGCAGCGCGG GGGATGACAG TCTGACGGGG
GGCACGGGGG ACGACCGCTT TGTCATGACC ACCTCCGGCG GCACCGACAC CGTAGGTGAT
TTTGATCTCG GTGACGCCGA CCTAGATGGG TTCTACAACG ACCAGATCGA TGTCAGCGGC
CTGTCCGGGG GCTCCGGGGC GGGCGGACTG GTGACACGCG CGGATGTGGT GGTGACGGAT
GATGGTTCCG GCAACGCCCT TTTGACCTTT CCCAATGGCG AACAGCTGGT CCTGCAAGGG
GTCGCACCGG CGCAGATCAG CTCGTATCAG CAGCTCTATG CTGCAGGTAT TCCCTGCTTC
ACTCCCGGCA TCCGCATCGC AACTGCGCGT GGGGCCGTTC CTGTGGAGCA TATCCGCAAG
GGTGACCTGC TGCAGACGGC GGACAATGGG TTTCAACCCG TGATCTGGAC CGGGCGGCGG
GATCTCAGCG CTGCAGAGCT GCGCGCCCGG CCACATTTGA CCCCGCTCAG GCTGCGCCCC
GGCGGGCCGC TTGCCAACGA TCGCCCATTG CTGGTTTCAC CGCAGCATCG TTTTATGCTC
GGACGCGCGC GGCTGGGCGA TATGGACCAT CTGCACGAGG CTTTTGTGCG CACGCGGCTG
CTGCAGAGCC TCGCGCCAGA GGATGTGACC CCCTGCAGGC CCGCAGCCGG GGTCAGCTAC
ATTCACCTGA TGACCGAGGC GCATCAGGTG ATTTTTGCCG AAGGTGTTGC CACCGAAACC
TTCTGGCCCG GCCCAGAGGC GCTGCGTGGC TTGTCCGAGG GCGACCGGCG CGAGCTGTTT
GATCTCTTTC CCGAGCTGTT CCTTGCCGGC GGCCTCTGCG GCGGCACGGG GCGGCACTTT
GTTGCCCGGG CCTATTGCCC ACTGGCGCGT GTTGATCTCA AACGTCGCGA CCTGCGGGCG
CTGGGCGCGC GCTCCGCGGC CTGA
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| Protein sequence | MLHSARKRQH RPGCSVLAVK ALPVSIGKWY ECKHEMTTYV VHGTNYNDPS FWASISEGSP
GHTLDFTGLP PNYEININAE AKTISIWDGT SWYSVGESGN TGTNATLGSP TLVDDFTVIL
ANNSDDYIEG SDNNDSLTGG TGNDTLSGDQ GDDTLRGGDG DDYLTGGEGN DNIDGGTGND
TIRGDNAWTN TSSGASGAST TPTTLTVTNS ADGPIELWWI DETGTAQYYA TLQPGDTRNQ
STFEEHNWIL RHPDGWYLEY IEGAPNQTVN FGSAGLNDTV YAGAGNDLID GMYGDDLLYG
EGNNDTIYGD YGSDTIYGGA GDDLLYGGDG DDTLAGGTGS DTMYGGAGND SMVGFDDADT
FILEDGFGND TIVGGEGGTD DDFVDLSNLT SGVTVTYTGD EAGTITDGSN TAEFSEIERI
RLTDQADVLD ASASLVGVDV DAGAGADTLT GSAGDDSLTG GTGDDRFVMT TSGGTDTVGD
FDLGDADLDG FYNDQIDVSG LSGGSGAGGL VTRADVVVTD DGSGNALLTF PNGEQLVLQG
VAPAQISSYQ QLYAAGIPCF TPGIRIATAR GAVPVEHIRK GDLLQTADNG FQPVIWTGRR
DLSAAELRAR PHLTPLRLRP GGPLANDRPL LVSPQHRFML GRARLGDMDH LHEAFVRTRL
LQSLAPEDVT PCRPAAGVSY IHLMTEAHQV IFAEGVATET FWPGPEALRG LSEGDRRELF
DLFPELFLAG GLCGGTGRHF VARAYCPLAR VDLKRRDLRA LGARSAA
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