Gene TM1040_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2676 
Symbol 
ID4077587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2812060 
End bp2813022 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID638008000 
Productacetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 
Protein accessionYP_614670 
Protein GI99082516 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.182193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA TCACCAACTA CGTCCGCCCC ACGATCAACT CGATCTTCTC GCGCCGCGAG 
GTGCCCGAGA ACCTGTGGAA GAAATGTGAC GAATGCGGCA CCATGCTGTT TCACCGCGAG
TTGAGCGACA ATCAGAACGT CTGCACCAAC TGCGGCCACC ACATGCACAT CACGCCGCGC
GACCGTTTCA AGGCGTTGTT TGATGGCGGT GTCTTTGCCG AGGTGAAGGT GCCGGAACCG
GTTGTCGATC CGCTGAAGTT CCGCGACCAG AAACGCTATC CCGATCGCCT GAAGGCGGCG
CAGAAAACCA CCGGCGAAAA AGAGGCGATG CTGGTCGCCA CCGGCGAAAT CGGCCGCACG
CCCATCGTGG CCGCCGCGCA GGACTTCTCC TTCATGGCGG GCTCCATGGG CATGTATGTC
GGCAACGCCA TCATTGCCGC CGCCGAAGAG GCCGTGAAAC TCGGCCGTCC GCTTGTGCTC
TTTTCCGCTG CAGGCGGCGC ACGCATGCAA GAAGGCATCC TGTCGCTGAT GCAGATGCCG
CGCACCACCG TCGCGGTCGA GATGCTCAAG GAAGCGGGCC TGCCCTATAT CGTCGTGCTG
ACCCACCCCA CCACCGGCGG TGTGACCGCG TCCTATGCGA TGCTGGGCGA TGTGCATATT
TCCGAACCCA ACGCGCTCAT TTGTTTTGCC GGTCCCCGCG TGATCGAGCA GACCATCCGC
GAAAAGCTGC CCGAGGGCTT TCAGCGTGCC GAATATCTCC TGGATCACGG CATGCTTGAT
CGGGTGACAC CGCGCACCAA GCTGCGCGAG GAGCTCATCA CCATCATCCG TATGATGATG
AAGCTGCCCC CGCAGGTGCA TGGCGATCTG CCGGCCCCGG CGCCCGAGGC ACAGCTCGAA
GCCCCGCAAA AAGACGAAAA AGCGCCTGCG GAGGACGCAT CGGGCGCAGA CAAGAGCGCC
TGA
 
Protein sequence
MNWITNYVRP TINSIFSRRE VPENLWKKCD ECGTMLFHRE LSDNQNVCTN CGHHMHITPR 
DRFKALFDGG VFAEVKVPEP VVDPLKFRDQ KRYPDRLKAA QKTTGEKEAM LVATGEIGRT
PIVAAAQDFS FMAGSMGMYV GNAIIAAAEE AVKLGRPLVL FSAAGGARMQ EGILSLMQMP
RTTVAVEMLK EAGLPYIVVL THPTTGGVTA SYAMLGDVHI SEPNALICFA GPRVIEQTIR
EKLPEGFQRA EYLLDHGMLD RVTPRTKLRE ELITIIRMMM KLPPQVHGDL PAPAPEAQLE
APQKDEKAPA EDASGADKSA