| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2672 |
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| Symbol | |
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| ID | 4077583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2807277 |
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| End bp | 2808515 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007996 |
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| Product | major facilitator transporter |
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| Protein accession | YP_614666 |
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| Protein GI | 99082512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGAT CCACCCCTCT GTTTACCCCC GTCCTGCTGG TGGGCTGCCT GATCATCATG
GTGAGCTTTG CCGTGCGCGC CTCCTTTGGG GTGTTCCAGA TCCCGATCGC CGATGATTTT
GGCTGGCTCC GGAGCGAGTT CTCCCTCGCC ATCGCGATCC AGAACCTCGC CTGGGGGATC
GGGCAGCCGA TCTTTGGCGC CATTGCCGAG AAGATCGGAG ACCGCAAGGC GATCATCATC
GGGGCCGTGG TCTATGCGGC GGGGCTTGTG CTGAGTGCCG GAGCCACCAC CCCCTTCGAG
ATGCAGGCCT ATGAGTGGCT GGTGGGCTTT GGCGTTGCGG GCACGGGCTT TGGCGTTGTG
CTTGCGGTGG TCGGCCGGGC GAGCTCGGAC GAGAACCGGT CCATGTCACT GGCGATTGTC
ACCGCGGCAG GCTCTGCGGG GCAGATCTTC GGCGCGCCGA CGGCGGAATA TATGCTTGGC
CTGATGTCCT GGCAGTCGGT GTTCCTGGTC TTTGCCGGCG TGGTGCTGGC GCTGATCCTG
TCGCTGCCCC TGATGCGCGC GCCGGTCTCT GCGGGCAAGG CGGAGCTTGA GGAAAGCATG
GGCGCGATCC TCAAAAAAGC CTTCCGCGAC CCGTCCTATA CGCTGATATT CCTCGGGTTT
TTCAGCTGTG GCTATCAGCT GGCCTTTGTG ACGGCGCATT TTCCGGCCTT TGTGACCGAG
ATGTGCGGGC CGATCATGCC CGGCGGTGTG CTGCATGGGA TGGGGATCAC CACCACCTCG
GCGCTGGGTG CGGTGTCGAT TTCGCTCATC GGTCTGGCGA ATGTGGCAGG CACGCTGCTC
GCGGGCTGGG CGGGCAAGCA TTACTCCAAG AAATATCTGC TGGCGGGGAT CTACACCGCG
CGGACCATCG TGGCCGGGGC CTTTATCCTG CTGCCGATCA CGCCTTTGTC GGTGATCCTC
TTTTCGGTGG CGATGGGCTC GCTCTGGCTC GCGACCGTGC CGCTTACTTC CGGGCTGGTC
GCGCATATCT ACGGGCTGCG CTACATGGGG ACGCTCTATG GGATCGTGTT CCTGAGCCAC
CAGATCGGCG GGTTCCTCGG CGTGTGGCTC GGTGGGCGGA TGTATGACAT CTATGGCGAC
TACACGATGG TCTGGTGGAT CGGTGTGGGC GTCGGAGCCT TCAGCGCGAT TGTGCATCTG
CCGGTGCGCG AGCGTCCGTT GCAGGCGGCT GCGGCCTGA
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| Protein sequence | MDRSTPLFTP VLLVGCLIIM VSFAVRASFG VFQIPIADDF GWLRSEFSLA IAIQNLAWGI
GQPIFGAIAE KIGDRKAIII GAVVYAAGLV LSAGATTPFE MQAYEWLVGF GVAGTGFGVV
LAVVGRASSD ENRSMSLAIV TAAGSAGQIF GAPTAEYMLG LMSWQSVFLV FAGVVLALIL
SLPLMRAPVS AGKAELEESM GAILKKAFRD PSYTLIFLGF FSCGYQLAFV TAHFPAFVTE
MCGPIMPGGV LHGMGITTTS ALGAVSISLI GLANVAGTLL AGWAGKHYSK KYLLAGIYTA
RTIVAGAFIL LPITPLSVIL FSVAMGSLWL ATVPLTSGLV AHIYGLRYMG TLYGIVFLSH
QIGGFLGVWL GGRMYDIYGD YTMVWWIGVG VGAFSAIVHL PVRERPLQAA AA
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