| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2659 |
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| Symbol | |
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| ID | 4077570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2793914 |
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| End bp | 2795953 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007983 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_614653 |
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| Protein GI | 99082499 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACG CAATCCCCCT GTTGCGCGAT ATCTTTGGAT TCGATGACTT TCGTCCCGGT
CAGGAGGAAA TCGTCGAGGC CGTGAGCGCG GGCGAAAACG TGCTCGCGAT CATGCCCACG
GGGGGTGGTA AATCCCTTTG TTATCAGTTG CCTGCGCTGC GCCGCGCGGG GATCACGGTG
GTGATCTCGC CGCTGATTGC GCTGATGCGC GATCAGGTCC GCGCCTTGCA GGAGGCCGGG
GTCTGTGCCG GGGCGCTTAC TTCTGGCAAT ACGGAAGAAG AGACCGAGGC GGTCTGGAAC
GCCATCGAGG CGGGCGAGCT GAAGCTTTTG TACATGGCGC CCGAACGGTT GGCGGCGGGC
AGCGCCATGG GCATGCTGCG CCGGATTGGT GTCTCGCTGA TCGCGGTGGA CGAGGCCCAC
TGCGTCAGCC AATGGGGCCA TGATTTCCGC CCGGATTACC TGCGCATCGG CGAGCTGCGC
CGCGCGCTCG ACGTGCCCTT GGCAGCCTTT ACCGCCACGG CAGATCAGGA AACCCAGGCC
GAGATCGTCC AGAAACTGTT CGACGGTGAG GCGCCGCGCG CCTTCTTGCG CGGCTTTGAC
CGGCCCAATA TTCACCTCGC CTTTGCCGCC AAGGACAGCC CGCGCAAACA GATCCTCGAG
TTCGCCGATG CGCGGCGCGG CCAGTCGGGC ATTGTCTATT GCGGCACCCG CGCCAAGACC
GAGGACATCG CCCGCGCGCT CGAGGCCTCT GGCCATGTCG CCTGCCATTA TCACGGCGGC
ATGGAGGCCG AGGACCGGCG CATCGTCGAG ACACGTTTCG CGCGCGAGGA TGGGCTGATC
GTGGTGGCTA CGGTGGCCTT TGGCATGGGC ATCGACAAGC CCGACATCCG CTGGGTCGCC
CACGCCGACC TACCCAAGAG CATCGAAGCC TATTATCAGG AAATCGGCCG CGCCGGCCGC
GATGGGGCGC CCGCCGAGAC GATGACGCTC TTTGGTCCCG AAGACATCCG CCTGCGCCGC
AACCAGATTG ACGAGGGGCT TGCACCGCCC GAACGGCGCG GCGCGGATCA TGCGCGGCTC
AACGCATTGC TGGGGCTGGC GGAGGCCATG AGTTGTCGCC GTCAGAGCCT GCTGAGTTAT
TTTGGTGAAA ATCCAGAGCC TTGCGGCCAT TGCGATCTGT GCGACACGCC GGTTGAGACC
TTTGACGGCA CCACCGCCGT GCGAAAGGCG CTCTCGGCCA TTCTGCGCAC CGAGGAGACC
TATGGCGCGG GGCATCTCAT TGACATTCTG ATCGGCAACG CCAACGACCG CGTGCGCCAG
AAGGGGCATG ACGATCTGTC GGTTTTTGCT TGCGGGCGCG AGCATTCAAA GCCCGAGTGG
CAGGCGATTT TCCGGCAGAT GATGGGGCGC GATCTGGTGC GGCCGGACCC GGAGCGTCAC
GGGGCACTCA GGATGACCGA ACCGGCGCTG CCGATCCTGC GTGGCGAGGA CAGCATCACC
CTGCGCAAGG ACACCATCAA ATCCGCCACC CGCCGCCCGG CGGTCAAGGC GCTGGTCTCG
GATGAGGATG CGCCCCTTTT GTCGGCGCTG AAGGCCAAGC GGCGCGCCCT CGCCGAGGCG
CAAAAAGTCC CGGCCTATGT GATCTTTCCC GATCGGACCC TCATCGAGAT GGCGGAGAAC
CGCCCGCAAA GCCTGGATGA AATGGCGCGG ATTTCGGGCG TGGGCGCCAA AAAGCTCGAG
CGGTATGGCG ATGCGTTTCT CAGTGTGATC ACCGGCGAGG CCGAAGCGCT GCACCCGGCG
CGGCGCAAGC TGGCGGGGCG CGCGCAGGGG TCGATTTACG ATACACTTCT GGAGGTGCAG
GCGCGGCTGC AACGCGGCGA ATGCGGCACT CAGAAACCGC TGACTTGCTC GGCCTCGCAA
CTGGCCAAAG TGGCGCAGAT GCGCAGCGAT GACGAGAGCG GGATGGAGCG GCTGTTGGGG
GAGCGCCGCG CGCAACGGTT TGCCTCGGCG TTTCTGGAGG TCCTGCGCGG CGCGGGCTAG
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| Protein sequence | MHDAIPLLRD IFGFDDFRPG QEEIVEAVSA GENVLAIMPT GGGKSLCYQL PALRRAGITV
VISPLIALMR DQVRALQEAG VCAGALTSGN TEEETEAVWN AIEAGELKLL YMAPERLAAG
SAMGMLRRIG VSLIAVDEAH CVSQWGHDFR PDYLRIGELR RALDVPLAAF TATADQETQA
EIVQKLFDGE APRAFLRGFD RPNIHLAFAA KDSPRKQILE FADARRGQSG IVYCGTRAKT
EDIARALEAS GHVACHYHGG MEAEDRRIVE TRFAREDGLI VVATVAFGMG IDKPDIRWVA
HADLPKSIEA YYQEIGRAGR DGAPAETMTL FGPEDIRLRR NQIDEGLAPP ERRGADHARL
NALLGLAEAM SCRRQSLLSY FGENPEPCGH CDLCDTPVET FDGTTAVRKA LSAILRTEET
YGAGHLIDIL IGNANDRVRQ KGHDDLSVFA CGREHSKPEW QAIFRQMMGR DLVRPDPERH
GALRMTEPAL PILRGEDSIT LRKDTIKSAT RRPAVKALVS DEDAPLLSAL KAKRRALAEA
QKVPAYVIFP DRTLIEMAEN RPQSLDEMAR ISGVGAKKLE RYGDAFLSVI TGEAEALHPA
RRKLAGRAQG SIYDTLLEVQ ARLQRGECGT QKPLTCSASQ LAKVAQMRSD DESGMERLLG
ERRAQRFASA FLEVLRGAG
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